RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TM4SF4P48230 202 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 RNASE9P60153 205 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 PCDHB4Q9Y5E5 795 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 CA12O43570 354 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 TSPAN1O60635 241 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 RTN2O75298 545 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 ERLIN2O94905 339 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 SSTR3P32745 418 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 ZNF200P98182 395 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 CCDC181Q5TID7 509 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 RUFY4Q6ZNE9 571 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 IMPG2Q9BZV3 1241 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 AP5M1Q9H0R1 490 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 TSKSQ9UJT2 592 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 RRN3P2A6NIE6 340 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 AP3M2P53677 418 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 GABRQQ9UN88 632 aa24.06■■□□□ 1.44
PDLIM2-203ENST00000339162 NRCAMQ92823 1304 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 ASS1P00966 412 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 NFICP08651 508 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 PSMC4P43686 418 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 TRPC3Q13507 836 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 RPS6KA1Q15418 735 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 PEX26Q7Z412 305 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 MTERF4Q7Z6M4 381 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 TRPV1Q8NER1 839 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 FAM81BQ96LP2 452 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 ZNF446Q9NWS9 450 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 CTTNBP2NLQ9P2B4 639 aa24.05■■□□□ 1.44
PDLIM2-203ENST00000339162 LACTBL1A8MY62 500 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 KCNK3O14649 394 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 CYP2C9P11712 490 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 GZMAP12544 262 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 PSEN2P49810 448 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 CPT1AP50416 773 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 SURF1Q15526 300 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 ZSWIM8A7E2V4 1837 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 TMEM88BA6NKF7 163 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 KIF3CO14782 793 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 B4GALT4O60513 344 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 KIF4AO95239 1232 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 IGHA2P01877 340 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 CFHP08603 1231 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 KRT19P08727 400 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 MCF2P10911 925 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 CD58P19256 250 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 GPC5P78333 572 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 SLFN11Q7Z7L1 901 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 OSMRQ99650 979 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 ADAMTS10Q9H324 1103 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 PCDHB2Q9Y5E7 798 aa24.04■■□□□ 1.44
PDLIM2-203ENST00000339162 MYADML2A6NDP7 307 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 TREHO43280 583 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 SEC31AO94979 1220 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 IRF5Q13568 498 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 SCARA5Q6ZMJ2 495 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 SPATA4Q8NEY3 305 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 DNAJB3Q8WWF6 145 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 MGAMO43451 1857 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 GPR32O75388 356 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 TNNC2P02585 160 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 TBXAS1P24557 533 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 MRPS25P82663 173 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 FSCN1Q16658 493 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 JADE1Q6IE81 842 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 NT5DC3Q86UY8 548 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 ZNF410Q86VK4 478 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 RBBP8NLQ8NC74 664 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 ANKRD36BP1Q96IX9 119 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 HINFPQ9BQA5 517 aa24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 ARGLU1Q9NWB6 273 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-203ENST00000339162 BRCA2P51587 3418 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 PASD1Q8IV76 773 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 MSANTD4Q8NCY6 345 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 CPA5Q8WXQ8 436 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 TRIB2Q92519 343 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 TAF4BQ92750 862 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 A0A1B0GUA9 196 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 AOC2O75106 756 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 WEE2P0C1S8 567 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 C6orf222P0C671 652 aaPredicted RBP24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 PAFAH1B1P43034 410 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 SGSM1Q2NKQ1 1148 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 SLC10A6Q3KNW5 377 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 ZNF394Q53GI3 561 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 C2CD6Q53TS8 623 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 SMC1BQ8NDV3 1235 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 RPGRIP1Q96KN7 1286 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 STXBP5LQ9Y2K9 1186 aa24.02■■□□□ 1.44
PDLIM2-203ENST00000339162 MBLAC1A4D2B0 266 aaPredicted RBP24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 IL18RAPO95256 599 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 AKR1A1P14550 325 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 GNA15P30679 374 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 CAP1Q01518 475 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 CLEC16AQ2KHT3 1053 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 ZNF699Q32M78 642 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 CFAP221Q4G0U5 840 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 PHLDB2Q86SQ0 1253 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 SYCE1Q8N0S2 351 aa24.01■■□□□ 1.43
PDLIM2-203ENST00000339162 ZNF653Q96CK0 615 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms