RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 DPP3Q9NY33 737 aa14.82□□□□□ -0.04
TUBA1B-202ENST00000336023 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 A0A1B0GTH6 734 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 LGALS16A8MUM7 142 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 N4BP1O75113 896 aaKnown RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 CYP3A5P20815 502 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 UBASH3AP57075 661 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 MLLT1Q03111 559 aaPredicted RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 RNASELQ05823 741 aaKnown RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 SOX4Q06945 474 aaPredicted RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 GSE1Q14687 1217 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 HERC6Q8IVU3 1022 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 C1orf127Q8N9H9 656 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 YME1L1Q96TA2 773 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 MRPL9Q9BYD2 267 aaKnown RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 RC3H2Q9HBD1 1191 aaKnown RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 GOLGA2P5Q9HBQ8 144 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 IFNKQ9P0W0 207 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 PMM2O15305 246 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 P4HA2O15460 535 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 AP5Z1O43299 807 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 PHACTR2O75167 634 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 MYL7Q01449 175 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 UBXN1Q04323 297 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 SCARA3Q6AZY7 606 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 SARM1Q6SZW1 724 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 ZNF280BQ86YH2 543 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 ITGA11Q9UKX5 1188 aa14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.81□□□□□ -0.04
TUBA1B-202ENST00000336023 CITO14578 2027 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 TEX33O43247 280 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 B4GALT3O60512 393 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 DDHD2O94830 711 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 VNN1O95497 513 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 CST3P01034 146 aaPredicted RBP14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 ITGB3P05106 788 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 KRT19P08727 400 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 HTRA4P83105 476 aaPredicted RBP14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 DSC1Q08554 894 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 CETN1Q12798 172 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 TUSC3Q13454 348 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 NCOA4Q13772 614 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 NR1I3Q14994 352 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 FKBP15Q5T1M5 1219 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 LRRC43Q8N309 656 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 FBXL13Q8NEE6 735 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 CXorf38Q8TB03 319 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 TAS1R2Q8TE23 839 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 FAM193BQ96PV7 902 aaPredicted RBP14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 RAD9AQ99638 391 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 CRACR2AQ9BSW2 395 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 XPO4Q9C0E2 1151 aaKnown RBP14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 GRPEL1Q9HAV7 217 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 CACNG4Q9UBN1 327 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 SIX4Q9UIU6 781 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 COQ4Q9Y3A0 265 aa14.8□□□□□ -0.04
TUBA1B-202ENST00000336023 HLA-DRAP01903 254 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 LRPAP1P30533 357 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 POLR2BP30876 1174 aaKnown RBP14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 BMP8BP34820 402 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 RBP5P82980 135 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 TRPC3Q13507 836 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 BTG3Q14201 252 aaPredicted RBP14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 C9orf57Q5W0N0 161 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 COLGALT2Q8IYK4 626 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 CMTR2Q8IYT2 770 aaKnown RBP14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 SEMA4DQ92854 862 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 TRIM5Q9C035 493 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 NRDE2Q9H7Z3 1164 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 RAB20Q9NX57 234 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 HCSTQ9UBK5 93 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 AGAP1Q9UPQ3 857 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 R3HCC1Q9Y3T6 440 aaKnown RBP14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 INSL6Q9Y581 213 aa14.79□□□□□ -0.04
TUBA1B-202ENST00000336023 ANO9A1A5B4 782 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 GTPBP10A4D1E9 387 aaKnown RBP14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 PPEF2O14830 753 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 CBFA2T2O43439 604 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 TLL1O43897 1013 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 TPM3P06753 285 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 RPL9P32969 192 aaKnown RBP14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 PIK3CAP42336 1068 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 CLCNKBP51801 687 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 UPP1Q16831 310 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 EXOC3L4Q17RC7 722 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 EPC2Q52LR7 807 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 GBP6Q6ZN66 633 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 PAAF1Q9BRP4 392 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 DNAJB4Q9UDY4 337 aa14.78□□□□□ -0.04
TUBA1B-202ENST00000336023 GRXCR1A8MXD5 290 aa14.77□□□□□ -0.04
TUBA1B-202ENST00000336023 PODXLO00592 558 aa14.77□□□□□ -0.04
TUBA1B-202ENST00000336023 PIRO00625 290 aa14.77□□□□□ -0.04
TUBA1B-202ENST00000336023 ZC3H11AO75152 810 aaKnown RBP eCLIP14.77□□□□□ -0.044e-12■■□□□ 12.6
TUBA1B-202ENST00000336023 LRRN2O75325 713 aa14.77□□□□□ -0.04
TUBA1B-202ENST00000336023 MYL6P60660 151 aa14.77□□□□□ -0.04
TUBA1B-202ENST00000336023 PTPN21Q16825 1174 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms