RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 HHIPQ96QV1 700 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 JPH2Q9BR39 696 aaPredicted RBP16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 THADAQ6YHU6 1953 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 ZMYM2Q9UBW7 1377 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 CASTOR2A6NHX0 329 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 E7EWF7 191 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 SGSM2O43147 1006 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 TSPAN1O60635 241 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 MOSPD3O75425 235 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 AXLP30530 894 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 TUSC3Q13454 348 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 JAKMIP3Q5VZ66 844 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 PMS2CLQ68D20 193 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 CYP2U1Q7Z449 544 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 CPB2Q96IY4 423 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 CSRNP2Q9H175 543 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 KLK14Q9P0G3 267 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 TAF6LQ9Y6J9 622 aa16.42■□□□□ 0.22
CTHRC1-201ENST00000330295 UPK3BL1B0FP48 263 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 UPK3BL2E5RIL1 263 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 PRRG1O14668 218 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 CALM1P0DP23 149 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 CALM2P0DP24 149 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 CALM3P0DP25 149 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 MAPK8P45983 427 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 LMAN2Q12907 356 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 SEMA3BQ13214 749 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 NFXL1Q6ZNB6 911 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 PRPF31Q8WWY3 499 aaKnown RBP16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 LENG9Q96B70 501 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 IL25Q9H293 177 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 UNC45AQ9H3U1 944 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 POLR3BQ9NW08 1133 aaPredicted RBP16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 SNTG2Q9NY99 539 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 EVLQ9UI08 416 aaPredicted RBP16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 BACE2Q9Y5Z0 518 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 KIF26AQ9ULI4 1882 aaPredicted RBP16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 PLXNB3Q9ULL4 1909 aa16.41■□□□□ 0.22
CTHRC1-201ENST00000330295 CFAP46Q8IYW2 2715 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 CCDC69A6NI79 296 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 GAS7O60861 476 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 GJA1P17302 382 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 FGFR3P22607 806 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 ELF1P32519 619 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 FAM193AP78312 1265 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 PCBP1Q15365 356 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 ZNF461Q8TAF7 563 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 PSPC1Q8WXF1 523 aaKnown RBP16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 ZFYVE19Q96K21 471 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 TMEM209Q96SK2 561 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 SLITRK6Q9H5Y7 841 aa16.4■□□□□ 0.22
CTHRC1-201ENST00000330295 DDX11L8A8MPP1 907 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 ROR1Q01973 937 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 CCNI2Q6ZMN8 369 aaPredicted RBP16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 ANO5Q75V66 913 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 C11orf74Q86VG3 221 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 RNF149Q8NC42 400 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 RIT2Q99578 217 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 GPR88Q9GZN0 384 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 PARP2Q9UGN5 583 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
CTHRC1-201ENST00000330295 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 J3QKU1 62 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 ABLIM3O94929 683 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 MYL4P12829 197 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 CIITAP33076 1130 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 TEAD2Q15562 447 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 TRIM61Q5EBN2 209 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 TMEM196Q5HYL7 178 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 PLA2G4FQ68DD2 849 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 IQCEQ6IPM2 695 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 MIER3Q7Z3K6 550 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 TCEAL8Q8IYN2 117 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 ELMOD1Q8N336 334 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 TMTC2Q8N394 836 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 LEMD2Q8NC56 503 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 RDM1Q8NG50 284 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 ESYT1Q9BSJ8 1104 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 NUSAP1Q9BXS6 441 aaKnown RBP16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 EBF1Q9UH73 591 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 INSL5Q9Y5Q6 135 aa16.38■□□□□ 0.21
CTHRC1-201ENST00000330295 PI4KAP42356 2102 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 ATXN7O15265 892 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms