RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CNGA2Q16280 664 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 FASTKD5Q7L8L6 764 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 METTL16Q86W50 562 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CMTR1Q8N1G2 835 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ELMOD1Q8N336 334 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 MAGEC3Q8TD91 643 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 C19orf60Q96EN9 201 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 TIMMDC1Q9NPL8 285 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ABCF3Q9NUQ8 709 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 PRPF3O43395 683 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 UBOX5O94941 541 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 PYGMP11217 842 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SNX30Q5VWJ9 437 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ACAP3Q96P50 834 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TMEM165Q9HC07 324 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 HESX1Q9UBX0 185 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TRIM49BA6NDI0 452 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 DPYSL4O14531 572 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MXI1P50539 228 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 UBE3AQ05086 875 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 NR5A1Q13285 461 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 RSBN1Q5VWQ0 802 aaPredicted RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 LRRC74BQ6ZQY2 392 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 UNC13DQ70J99 1090 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ZNF564Q8TBZ8 553 aaPredicted RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ABHD8Q96I13 439 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 KLHL31Q9H511 634 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CYP26B1Q9NR63 512 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SLC12A6Q9UHW9 1150 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 NPHP4O75161 1426 aaPredicted RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 HNRNPDLO14979 420 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SASH3O75995 380 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ARPC4P59998 168 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SLC34A1Q06495 639 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 DDR1Q08345 913 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 NECTIN1Q15223 517 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 RGS21Q2M5E4 152 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 PLEKHM3Q6ZWE6 761 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 JAMLQ86YT9 394 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CCNYL1Q8N7R7 359 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 PI4K2BQ8TCG2 481 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SERPINB12Q96P63 405 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 BBS2Q9BXC9 721 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CIDEBQ9UHD4 219 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 WDR17Q8IZU2 1322 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 GRK2P25098 689 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 LTKP29376 864 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 LIFRP42702 1097 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 DMC1Q14565 340 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MICU2Q8IYU8 434 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SPATA17Q96L03 361 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TRIM45Q9H8W5 580 aaPredicted RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 EML4Q9HC35 981 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 DDX18Q9NVP1 670 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TAGLN3Q9UI15 199 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CPSF3Q9UKF6 684 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 KCNH4Q9UQ05 1017 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CDY2AQ9Y6F7 541 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CDY1Q9Y6F8 540 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 USP17L12C9JPN9 530 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 USP17L21D6R901 530 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 FKBP6O75344 327 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ITIH2P19823 946 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 GPC5P78333 572 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 NR1I3Q14994 352 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 REXO1L1PQ8IX06 675 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 AENQ8WTP8 325 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 EZH1Q92800 747 aaPredicted RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 NOL6Q9H6R4 1146 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CYLDQ9NQC7 956 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TMCO1Q9UM00 188 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 IPPQ9Y573 584 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 SPAG6O75602 509 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 KRT26Q7Z3Y9 468 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 PASD1Q8IV76 773 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 RBM46Q8TBY0 533 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MDM1Q8TC05 714 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 GDPD5Q8WTR4 605 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MAGED4Q96JG8 741 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 CNDP1Q96KN2 507 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 FANCEQ9HB96 536 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 UNC13CQ8NB66 2214 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MAP3K15Q6ZN16 1313 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ZCCHC11Q5TAX3 1644 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 STX7O15400 261 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MED7O43513 233 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 RCAN1P53805 252 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 OTUD4Q01804 1114 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 LLGL1Q15334 1064 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 BARGINQ6ZT62 677 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 NDUFAF2Q8N183 169 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 OLA1Q9NTK5 396 aaKnown RBP5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 MOSPD1Q9UJG1 213 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 GOLGA8SH3BPF8 625 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 GOLGA8MH3BSY2 632 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TMEM63BQ5T3F8 832 aa5.64□□□□□ -1.51
SDR42E1-201ENST00000328945 TSHZ1Q6ZSZ6 1077 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms