RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
TSFM-201ENST00000323833 GLP2RO95838 553 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 URODP06132 367 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 BRCC3P46736 316 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 GLUD2P49448 558 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 FAM171A1Q5VUB5 890 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 KIAA0319Q5VV43 1072 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 LLGL2Q6P1M3 1020 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 CD302Q8IX05 232 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 GPD1LQ8N335 351 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 VN1R2Q8NFZ6 395 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 DDX27Q96GQ7 796 aaKnown RBP16.79■□□□□ 0.28
TSFM-201ENST00000323833 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
TSFM-201ENST00000323833 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 CHST7Q9NS84 486 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 HSPBP1Q9NZL4 362 aa16.79■□□□□ 0.28
TSFM-201ENST00000323833 UBQLN1Q9UMX0 589 aaKnown RBP16.79■□□□□ 0.28
TSFM-201ENST00000323833 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 H3BQ06 376 aaPredicted RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 TBX10O75333 385 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 RPL9P32969 192 aaKnown RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 NDUFV1P49821 464 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 DSG1Q02413 1049 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 KCNB1Q14721 858 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 TMEM132DQ14C87 1099 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 RTP2Q5QGT7 225 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 KIAA1841Q6NSI8 718 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 CEP57Q86XR8 500 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 ATXN2LQ8WWM7 1075 aaKnown RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 KLHL5Q96PQ7 755 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 CDCA3Q99618 268 aaPredicted RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 ASB7Q9H672 318 aa16.78■□□□□ 0.28
TSFM-201ENST00000323833 RBAKQ9NYW8 714 aaPredicted RBP16.78■□□□□ 0.28
TSFM-201ENST00000323833 TSC2P49815 1807 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 KIAA0391O15091 583 aaKnown RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 KINO60870 393 aaKnown RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 IL18RAPO95256 599 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 CYP3A5P20815 502 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 LRPAP1P30533 357 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 CYP2J2P51589 502 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 KCNQ1P51787 676 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 UBE2HP62256 183 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 MRPS5P82675 430 aaKnown RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 POU5F1Q01860 360 aaKnown RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 KCNC3Q14003 757 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 CLUL1Q15846 466 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 SPATA1Q5VX52 437 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 PRSS55Q6UWB4 352 aaPredicted RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 HS2ST1Q7LGA3 356 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 CBWD2Q8IUF1 395 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 RDH13Q8NBN7 331 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 FAM84AQ96KN4 292 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 CLEC1BQ9P126 229 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 BARX2Q9UMQ3 279 aaPredicted RBP16.77■□□□□ 0.28
TSFM-201ENST00000323833 MAPK8IP1Q9UQF2 711 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 DERAQ9Y315 318 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 PCDHA5Q9Y5H7 936 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.28
TSFM-201ENST00000323833 C2orf16Q68DN1 1984 aa16.77■□□□□ 0.27
TSFM-201ENST00000323833 PPEF2O14830 753 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 RPL17P18621 184 aaKnown RBP16.76■□□□□ 0.27
TSFM-201ENST00000323833 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
TSFM-201ENST00000323833 ELAVL2Q12926 359 aaKnown RBP16.76■□□□□ 0.27
TSFM-201ENST00000323833 GLYCTKQ8IVS8 523 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 SMYD4Q8IYR2 804 aaPredicted RBP16.76■□□□□ 0.27
TSFM-201ENST00000323833 BEST2Q8NFU1 509 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 ASB2Q96Q27 587 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 TTPALQ9BTX7 342 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 KCTD10Q9H3F6 313 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 PDE11AQ9HCR9 933 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 C2CD2Q9Y426 696 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 HCFC2Q9Y5Z7 792 aa16.76■□□□□ 0.27
TSFM-201ENST00000323833 ZNF233A6NK53 670 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 TEX28O15482 410 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 SMC2O95347 1197 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 EPCAMP16422 314 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 FGFR3P22607 806 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 KLRC2P26717 231 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 TKTP29401 623 aaKnown RBP16.75■□□□□ 0.27
TSFM-201ENST00000323833 MCM4P33991 863 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 AAK1Q2M2I8 961 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 LEXMQ3ZCV2 418 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.75■□□□□ 0.27
TSFM-201ENST00000323833 CLEC17AQ6ZS10 378 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
TSFM-201ENST00000323833 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
TSFM-201ENST00000323833 SLC22A17Q8WUG5 538 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
TSFM-201ENST00000323833 FBXL18Q96ME1 805 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms