RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 CA4P22748 312 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 CYP3A7P24462 503 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ATP5DP30049 168 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 PMS2P54278 862 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 HSDL1Q3SXM5 330 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 GNASQ5JWF2 1037 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SCN4BQ8IWT1 228 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SIX6OS1Q8N1H7 587 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 MDM1Q8TC05 714 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SIK2Q9H0K1 926 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 DHX35Q9H5Z1 703 aaKnown RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 RRP15Q9Y3B9 282 aaKnown RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SCINQ9Y6U3 715 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ADCYAP1R1P41586 468 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 MARCKSL1P49006 195 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 NOP9Q86U38 636 aaKnown RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 JAMLQ86YT9 394 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 RHOT1Q8IXI2 618 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 DCLK2Q8N568 766 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 FBXO25Q8TCJ0 367 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 PYROXD1Q8WU10 500 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 FAM193BQ96PV7 902 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-201ENST00000321105 OSMRQ99650 979 aa11.68□□□□□ -0.54
TOP3A-201ENST00000321105 SPAG7O75391 227 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ZBED1O96006 694 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 CYP3A4P08684 503 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 PDGFRAP16234 1089 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ARSEP51690 589 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 CYP24A1Q07973 514 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 BTNL9Q6UXG8 535 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 HACE1Q8IYU2 909 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ZBED8Q8IZ13 594 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 KLF6Q99612 283 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 C10orf88Q9H8K7 445 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 PHRF1Q9P1Y6 1649 aaKnown RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 IGLV3-22A0A075B6J6 115 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 TJP3O95049 919 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 CYP2C9P11712 490 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 GLE1Q53GS7 698 aaKnown RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 FAXCQ5TGI0 409 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 RWDD4Q6NW29 188 aaKnown RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 AIPL1Q9NZN9 384 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ERFP50548 548 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 SNX16P57768 344 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 LAMTOR4Q0VGL1 99 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 CUL2Q13617 745 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 GEN1Q17RS7 908 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 KLRG1Q96E93 195 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 RILPQ96NA2 401 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
TOP3A-201ENST00000321105 HUS1O60921 280 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 MOCS2O96007 188 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 INHBAP08476 426 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 HOXA7P31268 230 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 TNFSF9P41273 254 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 FKBP1CQ5VVH2 108 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 IZUMO3Q5VZ72 239 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 LENG9Q96B70 501 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 OSBPL8Q9BZF1 889 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PFASO15067 1338 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PIK3CDO00329 1044 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PIAS1O75925 651 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 STK10O94804 968 aaKnown RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 SDC4P31431 198 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 SLC29A2Q14542 456 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PLCB4Q15147 1175 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 GPC2Q8N158 579 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 RUNDC3BQ96NL0 473 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 GCOM2Q9BZD3 368 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 ABCC6O95255 1503 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 ALS2Q96Q42 1657 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 H3BRB1 525 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PODXLO00592 558 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 ZNF862O60290 1169 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 GH1P01241 217 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 AKAP5P24588 427 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 FKBP1AP62942 108 aaKnown RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 TMEM132DQ14C87 1099 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 CATSPERGQ6ZRH7 1159 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PRUNE1Q86TP1 453 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 ACOT1Q86TX2 421 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 TMEM161BQ8NDZ6 487 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 OR5B17Q8NGF7 314 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 WNT8AQ9H1J5 351 aa11.66□□□□□ -0.54
TOP3A-201ENST00000321105 TUT1Q9H6E5 874 aaKnown RBP11.66□□□□□ -0.54
TOP3A-201ENST00000321105 PARVAQ9NVD7 372 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms