RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PARVGQ9HBI0 331 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 SAYSD1Q9NPB0 183 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 KLHL11Q9NVR0 708 aa10.27□□□□□ -0.77
PTPRA-202ENST00000318266 ADGRA3Q8IWK6 1321 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 A0A1W2PPM1 405 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 MSH4O15457 936 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 DCTN3O75935 186 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ASMTLO95671 621 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ACADSP16219 412 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 RANBP1P43487 201 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 RHBDL3P58872 404 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 CCDC15Q0P6D6 951 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 MOGSQ13724 837 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 SPARCL1Q14515 664 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 PRR11Q96HE9 360 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF333Q96JL9 665 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 FAM84AQ96KN4 292 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 FGD4Q96M96 766 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 LRRC19Q9H756 370 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 VPS37BQ9H9H4 285 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ATP8B3O60423 1300 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 NPTXRO95502 500 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 CPA2P48052 419 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 TRAF1Q13077 416 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 BMT2Q1RMZ1 405 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 PTF1AQ7RTS3 328 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 OTOAQ7RTW8 1153 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 EPS8L1Q8TE68 723 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 DYDC2Q96IM9 177 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 TRAIPQ9BWF2 469 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 DCLRE1BQ9H816 532 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 WDR35Q9P2L0 1181 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 STOML1Q9UBI4 398 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 STARD13Q9Y3M8 1113 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ARFGEF1Q9Y6D6 1849 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 GPR75-ASB3A0A0A6YYF3 556 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 GOLGA8SH3BPF8 625 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 GOLGA8MH3BSY2 632 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 MEIS2O14770 477 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 BANF1O75531 89 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ATP5HO75947 161 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ZSCAN5DPP0CG00 497 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 CNGA1P29973 690 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-202ENST00000318266 VHLP40337 213 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 PIK3CAP42336 1068 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 RASSF2P50749 326 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 PLEKHG4Q58EX7 1191 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ACSBG2Q5FVE4 666 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 C10orf82Q8WW14 230 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 DHX38Q92620 1227 aaKnown RBP10.26□□□□□ -0.77
PTPRA-202ENST00000318266 INPP5DQ92835 1189 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 MCUR1Q96AQ8 359 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 SMC6Q96SB8 1091 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 EPAS1Q99814 870 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 CADM1Q9BY67 442 aaKnown RBP10.26□□□□□ -0.77
PTPRA-202ENST00000318266 KIAA1586Q9HCI6 787 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 FBXO6Q9NRD1 293 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-202ENST00000318266 LRRC4BQ9NT99 713 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 ASB3Q9Y575 518 aa10.26□□□□□ -0.77
PTPRA-202ENST00000318266 EDF1O60869 148 aaKnown RBP10.25□□□□□ -0.77
PTPRA-202ENST00000318266 EYA4O95677 639 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 SNHG28P0DPA3 235 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 RALAP11233 206 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 BMP3P12645 472 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 PLS3P13797 630 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 MAPK4P31152 587 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 MAGEA4P43358 317 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 FSTL1Q12841 308 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 P3H1Q32P28 736 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 OR52E8Q6IFG1 317 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 PPP1R18Q6NYC8 613 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 LVRNQ6Q4G3 990 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 C4orf50Q6ZRC1 276 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 VPS52Q8N1B4 723 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 ENDOVQ8N8Q3 282 aaKnown RBP10.25□□□□□ -0.77
PTPRA-202ENST00000318266 B4GALNT2Q8NHY0 566 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 RFWD2Q8NHY2 731 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 LMO3Q8TAP4 145 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 LENG9Q96B70 501 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 CCDC127Q96BQ5 260 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 USP20Q9Y2K6 914 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 WASF2Q9Y6W5 498 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 TBX10O75333 385 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 PTPN4P29074 926 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 ZBTB16Q05516 673 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 KAZNQ674X7 775 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 CLNKQ7Z7G1 428 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 TRABD2AQ86V40 505 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 GLIS1Q8NBF1 620 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 WDR60Q8WVS4 1066 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 PSPC1Q8WXF1 523 aaKnown RBP10.25□□□□□ -0.77
PTPRA-202ENST00000318266 CBWD1Q9BRT8 395 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 OLFML3Q9NRN5 406 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 PCMTD2Q9NV79 361 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms