RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 HAPLN3Q96S86 360 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 HSD17B14Q9BPX1 270 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GPAMQ9HCL2 828 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TRIM33Q9UPN9 1127 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PARP4Q9UKK3 1724 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 A8MUI8 341 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 C6orf229H3BNL8 230 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GSC2O15499 205 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 LYNP07948 512 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 RAP1GDS1P52306 607 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ASPHQ12797 758 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 MED21Q13503 144 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PPP1R15BQ5SWA1 713 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 KRT39Q6A163 491 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CGB2Q6NT52 195 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CYP4F22Q6NT55 531 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 RINT1Q6NUQ1 792 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GSTA5Q7RTV2 222 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 EXD1Q8NHP7 514 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 VCPIP1Q96JH7 1222 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SIKE1Q9BRV8 207 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CADM1Q9BY67 442 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TFCP2L1Q9NZI6 479 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TBK1Q9UHD2 729 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SERPINB13Q9UIV8 391 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 THRAP3Q9Y2W1 955 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GMEB1Q9Y692 573 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SCN11AQ9UI33 1791 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CFAP69A5D8W1 941 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 I3L4J1 428 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TMCC1O94876 653 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PROSCO94903 275 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GSTT1P30711 240 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SREBF1P36956 1147 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CYP2J2P51589 502 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SPIRE1Q08AE8 756 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TRIM72Q6ZMU5 477 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ACAD11Q709F0 780 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PCGF5Q86SE9 256 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ETNPPLQ8TBG4 499 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 C1orf54Q8WWF1 131 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 MTBPQ96DY7 904 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ACCSQ96QU6 501 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ST6GALNAC4Q9H4F1 302 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SAYSD1Q9NPB0 183 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 NYAP2Q9P242 653 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 BCAP29Q9UHQ4 241 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SUGT1Q9Y2Z0 365 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PKD1L3Q7Z443 1732 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PIK3CDO00329 1044 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 DNALI1O14645 258 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TRIM49P0CI25 452 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TRIM49CP0CI26 452 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SPATA31C1P0DKV0 1188 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CREB1P16220 341 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PGM1P36871 562 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 MARCKSL1P49006 195 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CASP5P51878 434 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ARL4CP56559 192 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 MGAT5Q09328 741 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 UBE2SQ16763 222 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 QRICH1Q2TAL8 776 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 KHDC1Q4VXA5 237 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TAF1BQ53T94 588 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PASD1Q8IV76 773 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 JADE3Q92613 823 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF75CPQ92670 426 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 NEU2Q9Y3R4 380 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 UMODL1Q5DID0 1318 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 IQANK1A0A1B0GTG1 560 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CBX6O95503 412 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CDK16Q00536 496 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GCNT1Q02742 428 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 RASA3Q14644 834 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ADRM1Q16186 407 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 INTS5Q6P9B9 1019 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GJB7Q6PEY0 223 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 OTOAQ7RTW8 1153 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ADGRF4Q8IZF3 695 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PDIK1LQ8N165 341 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TTC13Q8NBP0 860 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SCG3Q8WXD2 468 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 IGSF9BQ9UPX0 1349 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 IGKV6D-41A0A0C4DH26 115 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ARHGAP10A1A4S6 786 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 HGSO14964 777 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 PABPC4LP0CB38 370 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MAGEA8P43361 318 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ACTR3P61158 418 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 TMEM259Q4ZIN3 620 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 NET1Q7Z628 596 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MTDHQ86UE4 582 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ZDHHC14Q8IZN3 488 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ANKLE1Q8NAG6 615 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 PSPC1Q8WXF1 523 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SPATA16Q9BXB7 569 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RTFDC1Q9BY42 306 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ACSS3Q9H6R3 686 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms