RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 MCEEQ96PE7 176 aa14.24□□□□□ -0.13
PCDHB9-201ENST00000316105 OSBPL8Q9BZF1 889 aa14.24□□□□□ -0.13
PCDHB9-201ENST00000316105 ERVK-9P63128 1117 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 SPOPLQ6IQ16 392 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 RPS6KC1Q96S38 1066 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 CCT8L2Q96SF2 557 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 SENP7Q9BQF6 1050 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 EPN3Q9H201 632 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 BRAFP15056 766 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 GTF2H1P32780 548 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 DSG3P32926 999 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 COILP38432 576 aaPredicted RBP14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 CUL2Q13617 745 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 CFAP157Q5JU67 520 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 TAS2R14Q9NYV8 317 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ANKRD63C9JTQ0 380 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 TBC1D12O60347 775 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ATP9AO75110 1047 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 SGSM1Q2NKQ1 1148 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 FAM102AQ5T9C2 384 aaPredicted RBP14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 PHLDB3Q6NSJ2 640 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ATP8B4Q8TF62 1192 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 UBR2Q8IWV8 1755 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 A0A1B0GUA9 196 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 KLRG2A4D1S0 409 aaPredicted RBP14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 TRIM66O15016 1216 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ZBED1O96006 694 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 KRT7P08729 469 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 KRT3P12035 628 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 RRM1P23921 792 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ARSEP51690 589 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 SLC29A2Q14542 456 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 LRRC31Q6UY01 552 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ZNF677Q86XU0 584 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 TSEN2Q8NCE0 465 aaKnown RBP14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 C9orf72Q96LT7 481 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 ACP6Q9NPH0 428 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 UBIAD1Q9Y5Z9 338 aa14.23□□□□□ -0.13
PCDHB9-201ENST00000316105 CCDC62Q6P9F0 684 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 TTC13Q8NBP0 860 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 LNX1Q8TBB1 728 aaPredicted RBP14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 FBXO25Q8TCJ0 367 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 CHMP6Q96FZ7 201 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 SMARCAD1Q9H4L7 1026 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 SALL4Q9UJQ4 1053 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 WDR91A4D1P6 747 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 NAMPTP43490 491 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 IER5Q5VY09 327 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 ICE2Q659A1 982 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 MCUR1Q96AQ8 359 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 ASNSD1Q9NWL6 643 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 HEY1Q9Y5J3 304 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 IGLV3-22A0A075B6J6 115 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 RALAP11233 206 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 BRD2P25440 801 aaKnown RBP14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 ARL4CP56559 192 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 LONRF1Q17RB8 773 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 FASTKD5Q7L8L6 764 aaKnown RBP14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 PRPF31Q8WWY3 499 aaKnown RBP14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 CYFIP2Q96F07 1278 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 NIF3L1Q9GZT8 377 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
PCDHB9-201ENST00000316105 ASB14A6NK59 587 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 IFRD2Q12894 506 aaPredicted RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 ITGB3BPQ13352 177 aaPredicted RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 GPAT2Q6NUI2 795 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 FAM47EQ6ZV65 393 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 TTC16Q8NEE8 873 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 ZNF473Q8WTR7 871 aaKnown RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 TRAIPQ9BWF2 469 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 AP5M1Q9H0R1 490 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 VPS33BQ9H267 617 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 PIK3R2O00459 728 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 MT-ND3P03897 115 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 ITIH2P19823 946 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 ATF7IP2Q5U623 682 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 NOP9Q86U38 636 aaKnown RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 ZBED8Q8IZ13 594 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 THOC1Q96FV9 657 aaKnown RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 TOGARAM1Q9Y4F4 1720 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 PGK2P07205 417 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 TFDP2Q14188 446 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 AGBL2Q5U5Z8 902 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 VSIG10LQ86VR7 867 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 MAP4K3Q8IVH8 894 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 CCNYQ8ND76 341 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 C1orf131Q8NDD1 294 aaKnown RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 KIF12Q96FN5 646 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 ACTR5Q9H9F9 607 aaPredicted RBP14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 SPC25Q9HBM1 224 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 LCMT1Q9UIC8 334 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 AGAP1Q9UPQ3 857 aa14.21□□□□□ -0.13
PCDHB9-201ENST00000316105 MYH14Q7Z406 1995 aaKnown RBP14.21□□□□□ -0.14
PCDHB9-201ENST00000316105 CPP00450 1065 aa14.21□□□□□ -0.14
PCDHB9-201ENST00000316105 ARL4AP40617 200 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms