RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 GPS1Q13098 491 aa13□□□□□ -0.33
EBF1-201ENST00000313708 LPCAT4Q643R3 524 aa13□□□□□ -0.33
EBF1-201ENST00000313708 CCSER1Q9C0I3 900 aa13□□□□□ -0.33
EBF1-201ENST00000313708 EBF3Q9H4W6 596 aa13□□□□□ -0.33
EBF1-201ENST00000313708 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
EBF1-201ENST00000313708 C15orf38-AP3S2A0A0A6YYH1 394 aa13□□□□□ -0.33
EBF1-201ENST00000313708 GFAPP14136 432 aa13□□□□□ -0.33
EBF1-201ENST00000313708 PSMC2P35998 433 aaKnown RBP13□□□□□ -0.33
EBF1-201ENST00000313708 BASP1P80723 227 aaKnown RBP13□□□□□ -0.33
EBF1-201ENST00000313708 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
EBF1-201ENST00000313708 ACSBG2Q5FVE4 666 aa13□□□□□ -0.33
EBF1-201ENST00000313708 MIIPQ5JXC2 388 aa13□□□□□ -0.33
EBF1-201ENST00000313708 ARPINQ7Z6K5 226 aa13□□□□□ -0.33
EBF1-201ENST00000313708 MRPS26Q9BYN8 205 aaKnown RBP13□□□□□ -0.33
EBF1-201ENST00000313708 USP20Q9Y2K6 914 aa13□□□□□ -0.33
EBF1-201ENST00000313708 TMED5Q9Y3A6 229 aa13□□□□□ -0.33
EBF1-201ENST00000313708 TBX10O75333 385 aa13□□□□□ -0.33
EBF1-201ENST00000313708 STARD3NLO95772 234 aa13□□□□□ -0.33
EBF1-201ENST00000313708 UQCRBP14927 111 aa13□□□□□ -0.33
EBF1-201ENST00000313708 GNAZP19086 355 aa13□□□□□ -0.33
EBF1-201ENST00000313708 DCUN1D2Q6PH85 259 aa13□□□□□ -0.33
EBF1-201ENST00000313708 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
EBF1-201ENST00000313708 IP6K1Q92551 441 aa13□□□□□ -0.33
EBF1-201ENST00000313708 ARL8BQ9NVJ2 186 aa13□□□□□ -0.33
EBF1-201ENST00000313708 SIK3Q9Y2K2 1263 aa13□□□□□ -0.33
EBF1-201ENST00000313708 UTYO14607 1347 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 H0YGN5 161 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 DAB1O75553 588 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 COMTP21964 271 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 SOX5P35711 763 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 PPARGP37231 505 aaPredicted RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 CCDC153Q494R4 210 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 ACAD11Q709F0 780 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 DHDDSQ86SQ9 333 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 ZNF75CPQ92670 426 aaPredicted RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 RAD54LQ92698 747 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 COX4I2Q96KJ9 171 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 NFS1Q9Y697 457 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 FLT1P17948 1338 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 AGLP35573 1532 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 GOLGA8TH3BQL2 631 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 MAGEB3O15480 346 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 DDHD2O94830 711 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 SERPINB1P30740 379 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 DYNLT1P63172 113 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 FOLH1Q04609 750 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 ITGADQ13349 1161 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 HEATR4Q86WZ0 1026 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 PHC3Q8NDX5 983 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 CALML6Q8TD86 181 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 RSL24D1Q9UHA3 163 aaKnown RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 ANAPC7Q9UJX3 599 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 CHKBQ9Y259 395 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 PFASO15067 1338 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 C1orf232A0A0U1RR37 186 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 CHMP2AO43633 222 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 PABPC4Q13310 644 aaKnown RBP eCLIP12.99□□□□□ -0.33
EBF1-201ENST00000313708 USH1GQ495M9 461 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 GJB7Q6PEY0 223 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 NET1Q7Z628 596 aaPredicted RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 ZBTB46Q86UZ6 589 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 OXNAD1Q96HP4 312 aaPredicted RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 CADM1Q9BY67 442 aaKnown RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 NEU2Q9Y3R4 380 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 MAD1L1Q9Y6D9 718 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 TMEM247A6NEH6 219 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 TAC1P20366 129 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 EVA1CP58658 441 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 TCHHL1Q5QJ38 904 aaPredicted RBP12.99□□□□□ -0.33
EBF1-201ENST00000313708 DUPD1Q68J44 220 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 NT5DC3Q86UY8 548 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 CATSPER3Q86XQ3 398 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 ATL2Q8NHH9 583 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 USP33Q8TEY7 942 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 KCNK16Q96T55 309 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 SEPT3Q9UH03 358 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 JCADQ9P266 1359 aa12.99□□□□□ -0.33
EBF1-201ENST00000313708 PDLIM1O00151 329 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 KIAA0391O15091 583 aaKnown RBP12.98□□□□□ -0.33
EBF1-201ENST00000313708 CREB1P16220 341 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 ZC2HC1CQ53FD0 456 aaPredicted RBP12.98□□□□□ -0.33
EBF1-201ENST00000313708 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 GPCPD1Q9NPB8 672 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 SCHIP1Q9P0W5 487 aaPredicted RBP12.98□□□□□ -0.33
EBF1-201ENST00000313708 RABGEF1Q9UJ41 708 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 CARD8Q9Y2G2 431 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 MYMKA6NI61 221 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 RPA3P35244 121 aaPredicted RBP12.98□□□□□ -0.33
EBF1-201ENST00000313708 COPAP53621 1224 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 LSAMPQ13449 338 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 TMEM132AQ24JP5 1023 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
EBF1-201ENST00000313708 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms