RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 AMFRQ9UKV5 643 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 PCDHB4Q9Y5E5 795 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 TLL2Q9Y6L7 1015 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 UMODL1Q5DID0 1318 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 CLSTN1O94985 981 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 IL18RAPO95256 599 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 F2P00734 622 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 CALCAP01258 141 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 PTPROQ16827 1216 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 ACAD10Q6JQN1 1059 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 WDR93Q6P2C0 686 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 RNF216Q9NWF9 866 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-201ENST00000309469 CNTN6Q9UQ52 1028 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 TARSL2A2RTX5 802 aaKnown RBP22.79■■□□□ 1.24
ATG4D-201ENST00000309469 SEC31AO94979 1220 aaKnown RBP22.79■■□□□ 1.24
ATG4D-201ENST00000309469 TMEM191BP0C7N4 346 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 ARF4P18085 180 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-201ENST00000309469 MYL6P60660 151 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 VSNL1P62760 191 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 SREBF2Q12772 1141 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 CLEC16AQ2KHT3 1053 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 SGSM1Q2NKQ1 1148 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 ZNF410Q86VK4 478 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 EFCAB13Q8IY85 973 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 TMEM192Q8IY95 271 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 HNRNPLLQ8WVV9 542 aaKnown RBP22.79■■□□□ 1.24
ATG4D-201ENST00000309469 SOCS4Q8WXH5 440 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 KAT2BQ92831 832 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 CCDC102AQ96A19 550 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 HES6Q96HZ4 224 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 CPB2Q96IY4 423 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 SCLT1Q96NL6 688 aa22.79■■□□□ 1.24
ATG4D-201ENST00000309469 TNPO2O14787 897 aaKnown RBP22.78■■□□□ 1.24
ATG4D-201ENST00000309469 TNNC2P02585 160 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 STAG3L1P0CL83 205 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 CXCL8P10145 99 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 CRHR2Q13324 411 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 TRPC3Q13507 836 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 TMEM270Q6UE05 265 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 LENG1Q96BZ8 264 aaPredicted RBP22.78■■□□□ 1.24
ATG4D-201ENST00000309469 ANKRD36BP1Q96IX9 119 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 APBA2Q99767 749 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 NRCAMQ92823 1304 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 SMIM10L2AP0DMW4 78 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 SMIM10L2BP0DMW5 78 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 CBX1P83916 185 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 SELENOOQ9BVL4 669 aa22.78■■□□□ 1.24
ATG4D-201ENST00000309469 EVPLQ92817 2033 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 DCAF8L1A6NGE4 600 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 TSPAN1O60635 241 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 MTA2O94776 668 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 IGHA2P01877 340 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 CYP1A2P05177 515 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 POU5F1Q01860 360 aaKnown RBP22.77■■□□□ 1.24
ATG4D-201ENST00000309469 CCDC70Q6NSX1 233 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 RBBP8NLQ8NC74 664 aaPredicted RBP22.77■■□□□ 1.24
ATG4D-201ENST00000309469 ZSWIM8A7E2V4 1837 aa22.77■■□□□ 1.24
ATG4D-201ENST00000309469 ERLIN1O75477 346 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 UNGP13051 313 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-201ENST00000309469 IRX5P78411 483 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-201ENST00000309469 KYAT1Q16773 422 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 UBR7Q8N806 425 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 RBM12Q9NTZ6 932 aaKnown RBP22.76■■□□□ 1.23
ATG4D-201ENST00000309469 GTF3C4Q9UKN8 822 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 Q9Y3F1 56 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 LACTBL1A8MY62 500 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 ERLIN2O94905 339 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 MCM3P25205 808 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 CPT1AP50416 773 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 MFSD10Q14728 455 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 C11orf63Q6NUN7 778 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 ZNF653Q96CK0 615 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 NIF3L1Q9GZT8 377 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 AP5M1Q9H0R1 490 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 ADAMTS10Q9H324 1103 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 FAM53CQ9NYF3 392 aa22.76■■□□□ 1.23
ATG4D-201ENST00000309469 A0A1B0GUA9 196 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 ATP8B1O43520 1251 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 CEP104O60308 925 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 TM4SF4P48230 202 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 RNASE9P60153 205 aaKnown RBP22.75■■□□□ 1.23
ATG4D-201ENST00000309469 CDC42EP1Q00587 391 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 KIZQ2M2Z5 673 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 ACTRT1Q8TDG2 376 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 LRRC1Q9BTT6 524 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 FAM49AQ9H0Q0 323 aaPredicted RBP22.75■■□□□ 1.23
ATG4D-201ENST00000309469 ALG6Q9Y672 507 aa22.75■■□□□ 1.23
ATG4D-201ENST00000309469 MEFVO15553 781 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 ATMINO43313 823 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 CYP1A1P04798 512 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 GNA15P30679 374 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 LONRF2Q1L5Z9 754 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 USP38Q8NB14 1042 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 PPP1R13LQ8WUF5 828 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 XYLT2Q9H1B5 865 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 CHORDC1Q9UHD1 332 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 ABT1Q9ULW3 272 aaKnown RBP22.74■■□□□ 1.23
ATG4D-201ENST00000309469 SMIM35A0A1B0GVV1 85 aa22.74■■□□□ 1.23
ATG4D-201ENST00000309469 MBLAC1A4D2B0 266 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms