RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 BLZF1Q9H2G9 400 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 RGS18Q9NS28 235 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 AGPAT5Q9NUQ2 364 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 CXXC1Q9P0U4 656 aaPredicted RBP8.95□□□□□ -0.98
CHD6-201ENST00000309279 TBK1Q9UHD2 729 aa8.95□□□□□ -0.98
CHD6-201ENST00000309279 CDV3Q9UKY7 258 aaKnown RBP8.95□□□□□ -0.98
CHD6-201ENST00000309279 A0A1B0GUA9 196 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 A0A1W2PPC1 479 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 SLC16A4O15374 487 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 PIP5K1CO60331 668 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 MGEA5O60502 916 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 TSPAN1O60635 241 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 ICMTO60725 284 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 ERLIN2O94905 339 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 ABL1P00519 1130 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 GLULP15104 373 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 ARF4P18085 180 aaPredicted RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 ENPP1P22413 925 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 FGFR4P22455 802 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 WDR5P61964 334 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 RACK1P63244 317 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 ASIC1P78348 528 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 FAM189BP81408 668 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 DPYDQ12882 1025 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 COASYQ13057 564 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 POSTNQ15063 836 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 HAUS6Q7Z4H7 955 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 SFR1Q86XK3 245 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 TDHQ8IZJ6 230 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 PHC3Q8NDX5 983 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 FLCNQ8NFG4 579 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 SPATA20Q8TB22 786 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 LINC01599Q8WXQ3 324 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 MTIF3Q9H2K0 278 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 DACT1Q9NYF0 836 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 PTPRSQ13332 1948 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 TRIOBPQ9H2D6 2365 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 CNTNAP2Q9UHC6 1331 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 SZT2Q5T011 3432 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 A0A0U1RQF3 1178 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 DENND3A2RUS2 1198 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 TTLL13PA6NNM8 815 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 C9IYK1 514 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 KINO60870 393 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 ZNF623O75123 536 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 EDN1P05305 212 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 PRKCBP05771 671 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 ZSCAN20P17040 1043 aaPredicted RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 NMT1P30419 496 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 BPIFB3P59826 476 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 MCL1Q07820 350 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 NCBP1Q09161 790 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 NOTUMQ6P988 496 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 SLC24A5Q71RS6 500 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 OR8H2Q8N162 312 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 PHOSPHO2Q8TCD6 241 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 TOP1MTQ969P6 601 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 CCDC51Q96ER9 411 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 ADAM2Q99965 735 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 MRPL44Q9H9J2 332 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 C1orf112Q9NSG2 853 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 HOOK1Q9UJC3 728 aaKnown RBP8.94□□□□□ -0.98
CHD6-201ENST00000309279 TBX20Q9UMR3 447 aa8.94□□□□□ -0.98
CHD6-201ENST00000309279 CDH23Q9H251 3354 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 K7ENM7 598 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 B4GALT5O43286 388 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 SNX2O60749 519 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 AP1G2O75843 785 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 PIGRP01833 764 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 CCDC172P0C7W6 258 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 POU3F3P20264 500 aaPredicted RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 STIP1P31948 543 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 MCM4P33991 863 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 PPM1FP49593 454 aaPredicted RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 CASP5P51878 434 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 CCDC15Q0P6D6 951 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 PNOCQ13519 176 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 PRPF4BQ13523 1007 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 ALCAMQ13740 583 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 KCNB1Q14721 858 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 ZC2HC1CQ53FD0 456 aaPredicted RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 UBXN11Q5T124 520 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 NT5DC1Q5TFE4 455 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 ZPBP2Q6X784 338 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.93□□□□□ -0.988e-7■■□□□ 12.5
CHD6-201ENST00000309279 EPM2AIP1Q7L775 607 aaPredicted RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 JPH3Q8WXH2 748 aaPredicted RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 HVCN1Q96D96 273 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 GSDMAQ96QA5 445 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 SLC9A7Q96T83 725 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 ACO2Q99798 780 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 MRPL4Q9BYD3 311 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 FGFBP2Q9BYJ0 223 aa8.93□□□□□ -0.98
CHD6-201ENST00000309279 NUCKS1Q9H1E3 243 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 ELAC1Q9H777 363 aaKnown RBP8.93□□□□□ -0.98
CHD6-201ENST00000309279 MKS1Q9NXB0 559 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms