RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GZF1Q9H116 711 aaPredicted RBP26.49■■□□□ 1.83
HOXC9-201ENST00000303450 RB1P06400 928 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 RPL9P32969 192 aaKnown RBP26.49■■□□□ 1.83
HOXC9-201ENST00000303450 CLCNKBP51801 687 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 VAMP7P51809 220 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 GUCY2FP51841 1108 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 DUOXA2Q1HG44 320 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 CCDC40Q4G0X9 1142 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 FBXO22Q8NEZ5 403 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 PLEKHO2Q8TD55 490 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 PAAF1Q9BRP4 392 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 COLEC11Q9BWP8 271 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 INTS13Q9NVM9 706 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 DPP3Q9NY33 737 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 SPG21Q9NZD8 308 aa26.49■■□□□ 1.83
HOXC9-201ENST00000303450 C5orf67F2Z3F1 127 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 GNA14O95837 355 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 TNNC2P02585 160 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 BFSP1Q12934 665 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 SLC39A11Q8N1S5 342 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 KLHL23Q8NBE8 558 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 MTMR12Q9C0I1 747 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 METTL14Q9HCE5 456 aaKnown RBP26.48■■□□□ 1.83
HOXC9-201ENST00000303450 ARMCX3Q9UH62 379 aaPredicted RBP26.48■■□□□ 1.83
HOXC9-201ENST00000303450 MYO9BQ13459 2157 aa26.48■■□□□ 1.83
HOXC9-201ENST00000303450 LRRIQ3A6PVS8 624 aaPredicted RBP26.47■■□□□ 1.83
HOXC9-201ENST00000303450 PODXLO00592 558 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 UPP1Q16831 310 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 ZNF697Q5TEC3 545 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 FRMD5Q7Z6J6 570 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 OR5B17Q8NGF7 314 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 ENOX1Q8TC92 643 aaKnown RBP26.47■■□□□ 1.83
HOXC9-201ENST00000303450 BORCS6Q96GS4 357 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 TMEM169Q96HH4 297 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 C11orf84Q9BUA3 381 aaPredicted RBP26.47■■□□□ 1.83
HOXC9-201ENST00000303450 PTPRJQ12913 1337 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 CHD9Q3L8U1 2897 aa26.47■■□□□ 1.83
HOXC9-201ENST00000303450 FGF18O76093 207 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 LRPAP1P30533 357 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 DLG4P78352 724 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 ENPEPQ07075 957 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 DCLRE1AQ6PJP8 1040 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 TMEM130Q8N3G9 435 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 IGSF21Q96ID5 467 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 FAM84AQ96KN4 292 aa26.46■■□□□ 1.83
HOXC9-201ENST00000303450 B3GAT3O94766 335 aa26.45■■□□□ 1.83
HOXC9-201ENST00000303450 AP3M2P53677 418 aa26.45■■□□□ 1.83
HOXC9-201ENST00000303450 CLDN10P78369 228 aa26.45■■□□□ 1.83
HOXC9-201ENST00000303450 KRT17Q04695 432 aa26.45■■□□□ 1.83
HOXC9-201ENST00000303450 TMEM173Q86WV6 379 aaPredicted RBP26.45■■□□□ 1.83
HOXC9-201ENST00000303450 TTYH1Q9H313 450 aaPredicted RBP26.45■■□□□ 1.83
HOXC9-201ENST00000303450 IKBKBO14920 756 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 TADA2AO75478 443 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 TRIM49P0CI25 452 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 TRIM49CP0CI26 452 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 GPM6BQ13491 265 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 DCAF17Q5H9S7 520 aaPredicted RBP26.44■■□□□ 1.82
HOXC9-201ENST00000303450 TCERG1LQ5VWI1 586 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 C9orf57Q5W0N0 161 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 CREBRFQ8IUR6 639 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 C1orf127Q8N9H9 656 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 THAP9Q9H5L6 903 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 MARCH5Q9NX47 278 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 ADAM28Q9UKQ2 775 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 ITGA11Q9UKX5 1188 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 R3HCC1Q9Y3T6 440 aaKnown RBP26.44■■□□□ 1.82
HOXC9-201ENST00000303450 NFE2L3Q9Y4A8 694 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 F8W810 466 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 KIF4AO95239 1232 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 ITGB1P05556 798 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 PLCB3Q01970 1234 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 MYL5Q02045 173 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 GPR153Q6NV75 609 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 TRAPPC11Q7Z392 1133 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 FAM114A1Q8IWE2 563 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 HASPINQ8TF76 798 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 BCL7CQ8WUZ0 217 aaPredicted RBP26.44■■□□□ 1.82
HOXC9-201ENST00000303450 ZNF516Q92618 1163 aa26.44■■□□□ 1.82
HOXC9-201ENST00000303450 ALG13Q9NP73 1137 aaKnown RBP26.44■■□□□ 1.82
HOXC9-201ENST00000303450 H3BNC9 293 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 ITGB3P05106 788 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 KRT19P08727 400 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 ZNF165P49910 485 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 C1orf220Q5T0J3 134 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 CNOT6LQ96LI5 555 aaKnown RBP26.43■■□□□ 1.82
HOXC9-201ENST00000303450 BPIFA3Q9BQP9 254 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 PUF60Q9UHX1 559 aaKnown RBP26.43■■□□□ 1.82
HOXC9-201ENST00000303450 NUB1Q9Y5A7 615 aa26.43■■□□□ 1.82
HOXC9-201ENST00000303450 ANO9A1A5B4 782 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 EPOPA6NHQ4 379 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 TMEM189-UBE2V1I3L0A0 370 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 STX10O60499 249 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 PHACTR2O75167 634 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 POLR2BP30876 1174 aaKnown RBP26.42■■□□□ 1.82
HOXC9-201ENST00000303450 MARSP56192 900 aaKnown RBP26.42■■□□□ 1.82
HOXC9-201ENST00000303450 MCCD1P59942 119 aaPredicted RBP26.42■■□□□ 1.82
HOXC9-201ENST00000303450 BIRC3Q13489 604 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 C3orf58Q8NDZ4 430 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 MMRN2Q9H8L6 949 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 MAGEC2Q9UBF1 373 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms