RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 KIF2AO00139 706 aaPredicted RBP13.97□□□□□ -0.17
CCDC7-202ENST00000302316 CST3P01034 146 aaPredicted RBP13.97□□□□□ -0.17
CCDC7-202ENST00000302316 CCL5P13501 91 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 SLC18A3Q16572 532 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.97□□□□□ -0.17
CCDC7-202ENST00000302316 CD302Q8IX05 232 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 SNX27Q96L92 541 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 ARID3AQ99856 593 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 C2CD2Q9Y426 696 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 RALGAPA2Q2PPJ7 1873 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 A0A087X0T9 212 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 RECQL4O94761 1208 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 ASS1P00966 412 aaKnown RBP13.97□□□□□ -0.17
CCDC7-202ENST00000302316 KRT19P08727 400 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 FAM228BP0C875 321 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 ANXA13P27216 316 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 VAV2P52735 878 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 MYL6P60660 151 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 CUL2Q13617 745 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
CCDC7-202ENST00000302316 UBXN11Q5T124 520 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 SCARA3Q6AZY7 606 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 FAM71AQ8IYT1 594 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 C1orf127Q8N9H9 656 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 SLC43A3Q8NBI5 491 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 KIF12Q96FN5 646 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 PLEKHA5Q9HAU0 1116 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 NUB1Q9Y5A7 615 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 PCDHA13Q9Y5I0 950 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
CCDC7-202ENST00000302316 CITO14578 2027 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 ARVCFO00192 962 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 GPR182O15218 404 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 KRT5P13647 590 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 TBXAS1P24557 533 aaPredicted RBP13.96□□□□□ -0.17
CCDC7-202ENST00000302316 AKAP5P24588 427 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 ARHGAP25P42331 645 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 MAGEA1P43355 309 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 ZNF699Q32M78 642 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 FBXO47Q5MNV8 452 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 NT5DC4Q86YG4 428 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
CCDC7-202ENST00000302316 TFR2Q9UP52 801 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 IPPQ9Y573 584 aa13.96□□□□□ -0.17
CCDC7-202ENST00000302316 CYP26A1O43174 497 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 ITGB3P05106 788 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 GHRP10912 638 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 PAK2Q13177 524 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.18
CCDC7-202ENST00000302316 CCDC122Q5T0U0 273 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 AGO3Q9H9G7 860 aaKnown RBP13.96□□□□□ -0.18
CCDC7-202ENST00000302316 TRIM10Q9UDY6 481 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 SIX4Q9UIU6 781 aa13.96□□□□□ -0.18
CCDC7-202ENST00000302316 RCCD1A6NED2 376 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 KRT86O43790 486 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 KIF5CO60282 957 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 CAND2O75155 1236 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 ABL1P00519 1130 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 TUBB4AP04350 444 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 CD52P31358 61 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 GNG11P61952 73 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 ETF1P62495 437 aaKnown RBP13.95□□□□□ -0.18
CCDC7-202ENST00000302316 KIF5AQ12840 1032 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 ZNF618Q5T7W0 954 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 GLYCTKQ8IVS8 523 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 TXLNBQ8N3L3 684 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 TSGA10Q9BZW7 698 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 NIF3L1Q9GZT8 377 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 XYLT2Q9H1B5 865 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 SEPT11Q9NVA2 429 aaKnown RBP13.95□□□□□ -0.18
CCDC7-202ENST00000302316 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 OGDHLQ9ULD0 1010 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 DERAQ9Y315 318 aa13.95□□□□□ -0.18
CCDC7-202ENST00000302316 R3HCC1Q9Y3T6 440 aaKnown RBP13.95□□□□□ -0.18
CCDC7-202ENST00000302316 SGPL1O95470 568 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 CKBP12277 381 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 POLR2BP30876 1174 aaKnown RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 PDE6CP51160 858 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 GUCY2FP51841 1108 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 LPIN1Q14693 890 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 FAM26DQ5JW98 314 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SYT10Q6XYQ8 523 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 ZNF662Q6ZS27 426 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 TMEM130Q8N3G9 435 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 DNAJC5GQ8N7S2 189 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SMG8Q8ND04 991 aaKnown RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 LNX1Q8TBB1 728 aaPredicted RBP13.94□□□□□ -0.18
CCDC7-202ENST00000302316 EPS8L1Q8TE68 723 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SLC20A1Q8WUM9 679 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 SYT11Q9BT88 431 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 LACRTQ9GZZ8 138 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 CXCL16Q9H2A7 254 aa13.94□□□□□ -0.18
CCDC7-202ENST00000302316 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms