RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ENDOD1O94919 500 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 CCZ1BP86790 482 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 CCZ1P86791 482 aaPredicted RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 CNDP1Q96KN2 507 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 ALDH6A1Q02252 535 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 VMP1Q96GC9 406 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 OSBPL10Q9BXB5 764 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 A2MP01023 1474 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 MTBPQ96DY7 904 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 TBC1D23Q9NUY8 699 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 ZHX2Q9Y6X8 837 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 RNF103O00237 685 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 GRIK1P39086 918 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 NOD2Q9HC29 1040 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 ZC3H7BQ9UGR2 993 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 CTSHP09668 335 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 SLC9A1P19634 815 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 SCARA3Q6AZY7 606 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 CCDC149Q6ZUS6 474 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 RHOT1Q8IXI2 618 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 GCNAQ96QF7 691 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
ABCA3-201ENST00000301732 SNX12Q9UMY4 172 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 PCDHGB4Q9UN71 923 aa12.98□□□□□ -0.33
ABCA3-201ENST00000301732 DEAF1O75398 565 aaPredicted RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 LGR5O75473 907 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 UPP2O95045 317 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 SLC29A2Q14542 456 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 LRRC34Q8IZ02 419 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 GLMNQ92990 594 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 USP13Q92995 863 aaPredicted RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 CYP4F12Q9HCS2 524 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 ADD3Q9UEY8 706 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 SLC8A2Q9UPR5 921 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 CFAP73A6NFT4 308 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 MEI4A8MW99 385 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 CCDC22O60826 627 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 CPB1P15086 417 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 GALCP54803 685 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 MRPL1Q9BYD6 325 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 WWP1Q9H0M0 922 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 CD274Q9NZQ7 290 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 PI4KBQ9UBF8 816 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 KLHL18O94889 574 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 DDX39BQ13838 428 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 GTF2H3Q13889 308 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 WDR72Q3MJ13 1102 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 ARL6IP4Q66PJ3 421 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 PNKPQ96T60 521 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 LATS2Q9NRM7 1088 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 POU1F1P28069 291 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 MEI1Q5TIA1 1274 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 LRRC31Q6UY01 552 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 HORMAD1Q86X24 394 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 FAM71DQ8N9W8 422 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 IPMKQ8NFU5 416 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 TEX12Q9BXU0 123 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 TMEM245Q9H330 911 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 CYP26B1Q9NR63 512 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 ITGA8P53708 1063 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 MFN1Q8IWA4 741 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
ABCA3-201ENST00000301732 BFARQ9NZS9 450 aa12.97□□□□□ -0.33
ABCA3-201ENST00000301732 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 LAMC2Q13753 1193 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 TFDP2Q14188 446 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 OR8H2Q8N162 312 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 PARP8Q8N3A8 854 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 LRRC71Q8N4P6 559 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 AKT1P31749 480 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 PTPN7P35236 360 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 SCARF1Q14162 830 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 ZNF235Q14590 738 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
ABCA3-201ENST00000301732 COQ7Q99807 217 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 PKP3Q9Y446 797 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 MYOM2P54296 1465 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 C5orf58C9J3I9 102 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 PRAMEF18Q5VWM3 479 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 FGD2Q7Z6J4 655 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 ARL10Q8N8L6 244 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms