RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 CDV3Q9UKY7 258 aaKnown RBP19.56■□□□□ 0.72
BBC3-201ENST00000300880 SMG5Q9UPR3 1016 aaKnown RBP19.56■□□□□ 0.72
BBC3-201ENST00000300880 PIN4Q9Y237 131 aaKnown RBP19.56■□□□□ 0.72
BBC3-201ENST00000300880 TMEM150BA6NC51 233 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 F8W810 466 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 SPTLC1O15269 473 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 LILRB5O75023 590 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 ZNF623O75123 536 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 SOD2P04179 222 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 IDEP14735 1019 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 SDHBP21912 280 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 RARRES1P49788 294 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 PRKCEQ02156 737 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 TARBP2Q15633 366 aaKnown RBP19.55■□□□□ 0.72
BBC3-201ENST00000300880 TSSK4Q6SA08 328 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 PARM1Q6UWI2 310 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 CYP26C1Q6V0L0 522 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 C1orf186Q6ZWK4 172 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 OTUD6AQ7L8S5 288 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 RNF168Q8IYW5 571 aaPredicted RBP19.55■□□□□ 0.72
BBC3-201ENST00000300880 ZNF710Q8N1W2 664 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 NELL1Q92832 810 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 FAM167AQ96KS9 214 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 RTKNQ9BST9 563 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 HERC2P3Q9BVR0 1158 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 GRPEL1Q9HAV7 217 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 PANK4Q9NVE7 773 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 KCND2Q9NZV8 630 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 FAN1Q9Y2M0 1017 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 CNOT1A5YKK6 2376 aaKnown RBP19.55■□□□□ 0.72
BBC3-201ENST00000300880 ATRXP46100 2492 aa19.55■□□□□ 0.72
BBC3-201ENST00000300880 KANSL1LA0AUZ9 987 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 CARNS1A5YM72 827 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 LAMTOR5O43504 91 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 GLUD1P00367 558 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 XKR3Q5GH77 459 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 PADI6Q6TGC4 694 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 CCDC65Q8IXS2 484 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 GPR161Q8N6U8 529 aaKnown RBP19.54■□□□□ 0.72
BBC3-201ENST00000300880 RSPH1Q8WYR4 309 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 CCDC43Q96MW1 224 aaKnown RBP19.54■□□□□ 0.72
BBC3-201ENST00000300880 BPIFA3Q9BQP9 254 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 SH2D3AQ9BRG2 576 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 GCOM2Q9BZD3 368 aaPredicted RBP19.54■□□□□ 0.72
BBC3-201ENST00000300880 GTPBP4Q9BZE4 634 aaKnown RBP19.54■□□□□ 0.72
BBC3-201ENST00000300880 EPC1Q9H2F5 836 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 RXFP1Q9HBX9 757 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 GDAQ9Y2T3 454 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 PCDHGA2Q9Y5H1 932 aa19.54■□□□□ 0.72
BBC3-201ENST00000300880 FRMD3A2A2Y4 597 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 PRR5-ARHGAP8B1AHC4 643 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 POMCP01189 267 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 ALDH2P05091 517 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 URODP06132 367 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 ADH1AP07327 375 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 CD72P21854 359 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 ARHGAP8P85298 464 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
BBC3-201ENST00000300880 LMNB2Q03252 620 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 EHHADHQ08426 723 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 RAD51AP2Q09MP3 1159 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 PSMD2Q13200 908 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 IQCB1Q15051 598 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 XKR9Q5GH70 373 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 CT47A1Q5JQC4 288 aaPredicted RBP19.53■□□□□ 0.72
BBC3-201ENST00000300880 ANO5Q75V66 913 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 PALB2Q86YC2 1186 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 KSR1Q8IVT5 923 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 B3GALT6Q96L58 329 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.53■□□□□ 0.728e-7■■■■□ 19.6
BBC3-201ENST00000300880 USP18Q9UMW8 372 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
BBC3-201ENST00000300880 PPP1R3GB7ZBB8 358 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 SKIP12755 728 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 CD44P16070 742 aaKnown RBP19.52■□□□□ 0.72
BBC3-201ENST00000300880 GUCY2CP25092 1073 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 NPEPPSP55786 919 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 UBXN2BQ14CS0 331 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 UVSSAQ2YD98 709 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 L1TD1Q5T7N2 865 aaKnown RBP19.52■□□□□ 0.72
BBC3-201ENST00000300880 PLA2G4FQ68DD2 849 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 SMYD4Q8IYR2 804 aaPredicted RBP19.52■□□□□ 0.72
BBC3-201ENST00000300880 ATRIPQ8WXE1 791 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 TMEM175Q9BSA9 504 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 BCO2Q9BYV7 579 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 PIDD1Q9HB75 910 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 NRBP2Q9NSY0 501 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 ZSCAN32Q9NX65 697 aa19.52■□□□□ 0.72
BBC3-201ENST00000300880 SEPT9Q9UHD8 586 aaPredicted RBP19.52■□□□□ 0.72
BBC3-201ENST00000300880 PRG3Q9Y2Y8 225 aaPredicted RBP19.52■□□□□ 0.72
BBC3-201ENST00000300880 FAM170BA6NMN3 283 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 TGM5O43548 720 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 NTHL1P78549 312 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 STK4Q13043 487 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 UBXN11Q5T124 520 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 MRPL10Q7Z7H8 261 aaKnown RBP19.51■□□□□ 0.71
BBC3-201ENST00000300880 LUZP1Q86V48 1076 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 COLGALT2Q8IYK4 626 aa19.51■□□□□ 0.71
BBC3-201ENST00000300880 CEP170P1Q96L14 293 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms