RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 LIMA1Q9UHB6 759 aaKnown RBP29.99■■■□□ 2.39
CHCHD4-201ENST00000295767 SCN1AP35498 2009 aa29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 PRKCSHP14314 528 aaPredicted RBP29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 KCNH2Q12809 1159 aa29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 TUSC3Q13454 348 aa29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 MIIPQ5JXC2 388 aa29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 NRDE2Q9H7Z3 1164 aa29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 DPP3Q9NY33 737 aa29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 LAMA2P24043 3122 aaKnown RBP29.98■■■□□ 2.39
CHCHD4-201ENST00000295767 STX10O60499 249 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 TNNC2P02585 160 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 CYP3A5P20815 502 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 AP3M2P53677 418 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 TDRD10Q5VZ19 366 aaKnown RBP29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 C15orf39Q6ZRI6 1047 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 C1orf127Q8N9H9 656 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 ANKRD20A12PQ8NF67 263 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 FAM193BQ96PV7 902 aaPredicted RBP29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 DNAJB4Q9UDY4 337 aa29.97■■■□□ 2.39
CHCHD4-201ENST00000295767 C4BPAP04003 597 aaKnown RBP29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 GTF2H1P32780 548 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 CBWD6Q4V339 395 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 CBWD3Q5JTY5 395 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 CBWD5Q5RIA9 395 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 SCARA3Q6AZY7 606 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 SV2AQ7L0J3 742 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 APTXQ7Z2E3 356 aaKnown RBP29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 TRAPPC11Q7Z392 1133 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 COLGALT2Q8IYK4 626 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 SP7Q8TDD2 431 aaPredicted RBP29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 CWH43Q9H720 699 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 TMEM8AQ9HCN3 771 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 LCHNA4D1U4 455 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 CASTOR2A6NHX0 329 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 AFPP02771 609 aaKnown RBP29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 FMO5P49326 533 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 MXI1P50539 228 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 ZACNQ401N2 412 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 VPS16Q9H269 839 aa29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 MRPL42Q9Y6G3 142 aaKnown RBP29.96■■■□□ 2.39
CHCHD4-201ENST00000295767 ZC3H11AO75152 810 aaKnown RBP eCLIP29.95■■■□□ 2.38
CHCHD4-201ENST00000295767 COPB1P53618 953 aaKnown RBP29.95■■■□□ 2.38
CHCHD4-201ENST00000295767 BIRC3Q13489 604 aa29.95■■■□□ 2.38
CHCHD4-201ENST00000295767 VWA3BQ502W6 1294 aa29.95■■■□□ 2.38
CHCHD4-201ENST00000295767 PAAF1Q9BRP4 392 aa29.95■■■□□ 2.38
CHCHD4-201ENST00000295767 ITGB3P05106 788 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 MYOGP15173 224 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 LRPAP1P30533 357 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 KRT39Q6A163 491 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 CXorf38Q8TB03 319 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 NDST4Q9H3R1 872 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 SIX4Q9UIU6 781 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 ITGA11Q9UKX5 1188 aa29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.94■■■□□ 2.38
CHCHD4-201ENST00000295767 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 LRRC10BA6NIK2 292 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 CLCNKBP51801 687 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 FIBCD1Q8N539 461 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 RABGGTAQ92696 567 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 PHACTR2O75167 634 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 VNN1O95497 513 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 MYL7Q01449 175 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 C9orf57Q5W0N0 161 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 PCDHA11Q9Y5I1 949 aa29.93■■■□□ 2.38
CHCHD4-201ENST00000295767 ANO9A1A5B4 782 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 PES1O00541 588 aaKnown RBP29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 PPEF2O14830 753 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 TPM2P07951 284 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 KRT19P08727 400 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 POLR2BP30876 1174 aaKnown RBP29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 FANCCQ00597 558 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 SPOUT1Q5T280 376 aaKnown RBP29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 TAS1R2Q8TE23 839 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 UROC1Q96N76 676 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 TMEM175Q9BSA9 504 aa29.92■■■□□ 2.38
CHCHD4-201ENST00000295767 PODXLO00592 558 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 N4BP1O75113 896 aaKnown RBP29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 SERPINC1P01008 464 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 CST3P01034 146 aaPredicted RBP29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 PBX3P40426 434 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 OR1G1P47890 313 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 SLC11A1P49279 550 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 UPP1Q16831 310 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 AGAP1Q9UPQ3 857 aa29.91■■■□□ 2.38
CHCHD4-201ENST00000295767 LINC00271P0C7V0 271 aa29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 RPL9P32969 192 aaKnown RBP29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 PBX2P40425 430 aa29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 BCAR1P56945 870 aa29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 DDX27Q96GQ7 796 aaKnown RBP29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 PBX4Q9BYU1 374 aa29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 YBX2Q9Y2T7 364 aaKnown RBP29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 PRG3Q9Y2Y8 225 aaPredicted RBP29.9■■■□□ 2.38
CHCHD4-201ENST00000295767 F8W810 466 aa29.89■■■□□ 2.38
CHCHD4-201ENST00000295767 PIRO00625 290 aa29.89■■■□□ 2.38
CHCHD4-201ENST00000295767 NRP1O14786 923 aa29.89■■■□□ 2.38
CHCHD4-201ENST00000295767 PMM2O15305 246 aa29.89■■■□□ 2.38
CHCHD4-201ENST00000295767 HLA-DRAP01903 254 aa29.89■■■□□ 2.38
CHCHD4-201ENST00000295767 GALTP07902 379 aa29.89■■■□□ 2.38
CHCHD4-201ENST00000295767 IGFBP6P24592 240 aaPredicted RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms