RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MROH7Q68CQ1 1323 aa16.88■□□□□ 0.29
NCKIPSD-201ENST00000294129 OSTNP61366 133 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 PACS2Q86VP3 889 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 LRRC71Q8N4P6 559 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 RNF25Q96BH1 459 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 SELENOSQ9BQE4 189 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 PCDHB2Q9Y5E7 798 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 MTA2O94776 668 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 C4BPAP04003 597 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 PGK2P07205 417 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 GNA15P30679 374 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 PSMD6Q15008 389 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 NUB1Q9Y5A7 615 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 MYPNQ86TC9 1320 aa16.87■□□□□ 0.29
NCKIPSD-201ENST00000294129 UNGP13051 313 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 CORO7P57737 925 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 NLRP14Q86W24 1093 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 CCT8L2Q96SF2 557 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 GPRC5DQ9NZD1 345 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 MTRF1LQ9UGC7 380 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 ECEL1O95672 775 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 GGPS1O95749 300 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 HSPA6P17066 643 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 PPP2R2AP63151 447 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 KRT17Q04695 432 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 CUL2Q13617 745 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 SCARA5Q6ZMJ2 495 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 ARFGAP2Q8N6H7 521 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 ZNF473Q8WTR7 871 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 EPB41L4BQ9H329 900 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 DHX33Q9H6R0 707 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 ADAM22Q9P0K1 906 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 PCYOX1Q9UHG3 505 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 MAFBQ9Y5Q3 323 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 GJB1P08034 283 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 TCF7P36402 384 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 STAT5BP51692 787 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 CAPSQ13938 189 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 SIX1Q15475 284 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 TMEM132AQ24JP5 1023 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 CCDC38Q502W7 563 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 CHADLQ6NUI6 762 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 C15orf39Q6ZRI6 1047 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 PRUNE1Q86TP1 453 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 MICALL1Q8N3F8 863 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 EPS8L3Q8TE67 593 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 MTFR1LQ9H019 292 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 PABPC3Q9H361 631 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 AZI2Q9H6S1 392 aa16.86■□□□□ 0.29
NCKIPSD-201ENST00000294129 GSTTP1A0A1W2PQM5 241 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 H0YCG3 227 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 ACSL3O95573 720 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 NAMPTP43490 491 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 RTP1P59025 263 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 CALCOCO2Q13137 446 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 CLUL1Q15846 466 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 RBBP8NLQ8NC74 664 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 PRPF31Q8WWY3 499 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 PCYT2Q99447 389 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 ADM5C9JUS6 153 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 PODXLO00592 558 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 USP2O75604 605 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 NCOA4Q13772 614 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 RNF187Q5TA31 235 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 PWWP2AQ96N64 755 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 PPP1R16BQ96T49 567 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 R3HDM2Q9Y2K5 976 aaKnown RBP16.85■□□□□ 0.29
NCKIPSD-201ENST00000294129 FARP2O94887 1054 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 CST3P01034 146 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 KAZNQ674X7 775 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 MOB2Q70IA6 237 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 MORC4Q8TE76 937 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 TRAPPC12Q8WVT3 735 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 TXLNGYQ9BZA5 131 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 MTMR12Q9C0I1 747 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 SOWAHBA6NEL2 793 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 PI4K2BG5E9Z4 385 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 ATP2A1O14983 1001 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 RALAP11233 206 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 IFI35P80217 286 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 TCEAL1Q15170 157 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 TMEM130Q8N3G9 435 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 ACSF2Q96CM8 615 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 SNCAIPQ9Y6H5 919 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 SSC5DA1L4H1 1573 aa16.84■□□□□ 0.29
NCKIPSD-201ENST00000294129 ARL2P36404 184 aa16.83■□□□□ 0.29
NCKIPSD-201ENST00000294129 TAS2R40P59535 323 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms