RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 CACTINQ8WUQ7 758 aaKnown RBP14.33□□□□□ -0.12
CCDC42-201ENST00000293845 CCDC127Q96BQ5 260 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
CCDC42-201ENST00000293845 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 BPIFA3Q9BQP9 254 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 PAAF1Q9BRP4 392 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 SRRTQ9BXP5 876 aaKnown RBP14.33□□□□□ -0.12
CCDC42-201ENST00000293845 ZNF576Q9H609 170 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 GOLGA2P5Q9HBQ8 144 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 METTL14Q9HCE5 456 aaKnown RBP14.33□□□□□ -0.12
CCDC42-201ENST00000293845 MARCH5Q9NX47 278 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 FAN1Q9Y2M0 1017 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 CHD7Q9P2D1 2997 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 IKBKBO14920 756 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 TMEM191BP0C7N4 346 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 KRT13P13646 458 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 TNNI1P19237 187 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 PBX3P40426 434 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 OR1G1P47890 313 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 CLCNKBP51801 687 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 VAMP7P51809 220 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 AP3M2P53677 418 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 TFAMQ00059 246 aaKnown RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 PLCB3Q01970 1234 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 DUOXA2Q1HG44 320 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 ANO6Q4KMQ2 910 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 C1orf220Q5T0J3 134 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 TMEM173Q86WV6 379 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 IGSF21Q96ID5 467 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 ANKRD36BP1Q96IX9 119 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 C11orf84Q9BUA3 381 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 COLEC11Q9BWP8 271 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 MTMR12Q9C0I1 747 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 NAT10Q9H0A0 1025 aaKnown RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 THAP9Q9H5L6 903 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 SPG21Q9NZD8 308 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 CACNG4Q9UBN1 327 aa14.32□□□□□ -0.12
CCDC42-201ENST00000293845 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
CCDC42-201ENST00000293845 ANO9A1A5B4 782 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 NT5C1B-RDH14C9J2C7 533 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 PODXLO00592 558 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 PIRO00625 290 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 EFEMP2O95967 443 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 GUCY2FP51841 1108 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 DLG4P78352 724 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 LMBRD2Q68DH5 695 aaPredicted RBP14.31□□□□□ -0.12
CCDC42-201ENST00000293845 DCLRE1AQ6PJP8 1040 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 C1orf127Q8N9H9 656 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 KLHL23Q8NBE8 558 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 FBXO22Q8NEZ5 403 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 CXorf38Q8TB03 319 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 ZNF516Q92618 1163 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 POP1Q99575 1024 aaKnown RBP14.31□□□□□ -0.12
CCDC42-201ENST00000293845 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 ITGA11Q9UKX5 1188 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 PRG3Q9Y2Y8 225 aaPredicted RBP14.31□□□□□ -0.12
CCDC42-201ENST00000293845 NFE2L3Q9Y4A8 694 aa14.31□□□□□ -0.12
CCDC42-201ENST00000293845 MYO7AQ13402 2215 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 H3BNC9 293 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 FGF18O76093 207 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 KIF4AO95239 1232 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 CAVIN2O95810 425 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 TNNC2P02585 160 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 ITGB1P05556 798 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 GTF2H1P32780 548 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 MYL5Q02045 173 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 UBE3AQ05086 875 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 TPD52L1Q16890 204 aaPredicted RBP14.3□□□□□ -0.12
CCDC42-201ENST00000293845 CCDC40Q4G0X9 1142 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 C9orf57Q5W0N0 161 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 CD300LGQ6UXG3 332 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 C15orf39Q6ZRI6 1047 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 TRAPPC11Q7Z392 1133 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 IRF2BP1Q8IU81 584 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 FAM114A1Q8IWE2 563 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 TRIM59Q8IWR1 403 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 RNF168Q8IYW5 571 aaPredicted RBP14.3□□□□□ -0.12
CCDC42-201ENST00000293845 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 BCL7CQ8WUZ0 217 aaPredicted RBP14.3□□□□□ -0.12
CCDC42-201ENST00000293845 ARNTL2Q8WYA1 636 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 SLC35C1Q96A29 364 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 TMEM169Q96HH4 297 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 ADAM28Q9UKQ2 775 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 LZTS1Q9Y250 596 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 TSC2P49815 1807 aa14.3□□□□□ -0.12
CCDC42-201ENST00000293845 EPOPA6NHQ4 379 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 F8W810 466 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 B3GAT3O94766 335 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 C4BPAP04003 597 aaKnown RBP14.29□□□□□ -0.12
CCDC42-201ENST00000293845 ITGB3P05106 788 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 TRIM49P0CI25 452 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 TRIM49CP0CI26 452 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 PAX3P23760 479 aa14.29□□□□□ -0.12
CCDC42-201ENST00000293845 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC42-201ENST00000293845 ZNF165P49910 485 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms