RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 MAP3K10Q02779 954 aa18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 LLGL1Q15334 1064 aa18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 MTERF2Q49AM1 385 aa18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 CDKAL1Q5VV42 579 aa18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 MTHFD1LQ6UB35 978 aa18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 RBM15Q96T37 977 aaKnown RBP eCLIP18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 TDRD3Q9H7E2 651 aaKnown RBP18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 DDX20Q9UHI6 824 aaKnown RBP18.46■□□□□ 0.55
PCDHA13-201ENST00000289272 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.54
PCDHA13-201ENST00000289272 CALB2P22676 271 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 PTPN4P29074 926 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 TNFAIP2Q03169 654 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 TRIM51Q9BSJ1 452 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 NPHS2Q9NP85 383 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 TYW5A2RUC4 315 aaKnown RBP18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 ENO1P06733 434 aaKnown RBP18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 ARL8AQ96BM9 186 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 MKNK1Q9BUB5 465 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 SLC38A10Q9HBR0 1119 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 EML4Q9HC35 981 aaKnown RBP18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 PARVAQ9NVD7 372 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 WHRNQ9P202 907 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 TRIM10Q9UDY6 481 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 TTLL3Q9Y4R7 772 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 DCCP43146 1447 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 IQCA1LA6NCM1 817 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 FAM196BA6NMK8 535 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 GOLGA8SH3BPF8 625 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 GLYCTKQ8IVS8 523 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 A1CFQ9NQ94 594 aaKnown RBP18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 GALCP54803 685 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 DEFA1P59665 94 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 DEFA3P59666 94 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 TMEM259Q4ZIN3 620 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 OLFML2BQ68BL8 750 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 FBXO33Q7Z6M2 555 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 PPM1NQ8N819 430 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 MTMR4Q9NYA4 1195 aa18.45■□□□□ 0.54
PCDHA13-201ENST00000289272 STAT3P40763 770 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 ROR1Q01973 937 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 STX3Q13277 289 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 LONRF1Q17RB8 773 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 KSR1Q8IVT5 923 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 ZKSCAN4Q969J2 545 aaPredicted RBP18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 AGXT2Q9BYV1 514 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 B2RBV5 119 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 TRIP10Q15642 601 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 OR9Q1Q8NGQ5 310 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 MMADHCQ9H3L0 296 aaPredicted RBP18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 hCG_2014768A0A024R1R8 64 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 SASH3O75995 380 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 MTMR1Q13613 665 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 FBXL16Q8N461 479 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 DTX3LQ8TDB6 740 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 ADA2Q9NZK5 511 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 KCND2Q9NZV8 630 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 SLC12A6Q9UHW9 1150 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 K7ERI5 159 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 ZNF18P17022 549 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 KIF19Q2TAC6 998 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 TRMT5Q32P41 509 aaKnown RBP18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 ARMCX2Q7L311 632 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 HOMEZQ8IX15 550 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 KIF2BQ8N4N8 673 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 CCT7Q99832 543 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 MANSC1Q9H8J5 431 aa18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 RPF1Q9H9Y2 349 aaKnown RBP18.44■□□□□ 0.54
PCDHA13-201ENST00000289272 UCHL3P15374 230 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 NUP107P57740 925 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 GRIN1Q05586 938 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 MAPK7Q13164 816 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ELMSAN1Q6PJG2 1045 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 OR2W6PQ8NHA6 318 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ZFRQ96KR1 1074 aaKnown RBP18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 WRNIP1Q96S55 665 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 HACD3Q9P035 362 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ARSEP51690 589 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 RMDN3Q96TC7 470 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 FLT1P17948 1338 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ABCE1P61221 599 aaKnown RBP18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 IL1RL1Q01638 556 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ZNF662Q6ZS27 426 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 FUKQ8N0W3 1084 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 APEX2Q9UBZ4 518 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 TFAMQ00059 246 aaKnown RBP18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 RCN1Q15293 331 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ZNF446Q9NWS9 450 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ZBBXA8MT70 800 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 GCLMP48507 274 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ZNF543Q08ER8 600 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 SPDYE1Q8NFV5 336 aaPredicted RBP18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 PPP2R3CQ969Q6 453 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 ZNF229Q9UJW7 825 aa18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 DBR1Q9UK59 544 aaKnown RBP18.43■□□□□ 0.54
PCDHA13-201ENST00000289272 STK4Q13043 487 aa18.42■□□□□ 0.54
PCDHA13-201ENST00000289272 SLC29A2Q14542 456 aa18.42■□□□□ 0.54
PCDHA13-201ENST00000289272 WLSQ5T9L3 541 aa18.42■□□□□ 0.54
PCDHA13-201ENST00000289272 KCNV1Q6PIU1 500 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms