RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ENC1O14682 589 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 ZNF500O60304 480 aaPredicted RBP14.33□□□□□ -0.12
ACER3-201ENST00000278544 SLC27A1Q6PCB7 646 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 IRF2BP2Q7Z5L9 587 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 TMC2Q8TDI7 906 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 HASPINQ8TF76 798 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 IFIH1Q9BYX4 1025 aaKnown RBP14.33□□□□□ -0.12
ACER3-201ENST00000278544 TAS2R14Q9NYV8 317 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
ACER3-201ENST00000278544 TNNC2P02585 160 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 DNAJC5GQ8N7S2 189 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 C1orf127Q8N9H9 656 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 CCDC51Q96ER9 411 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 ANKRD36BP1Q96IX9 119 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 WDR24Q96S15 920 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 GAD1Q99259 594 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 IMPG2Q9BZV3 1241 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 TRPV2Q9Y5S1 764 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 TET1Q8NFU7 2136 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 HCRTO43612 131 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 MGEA5O60502 916 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 KPNA6O60684 536 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 CLTAP09496 248 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 CYLC1P35663 651 aaPredicted RBP14.32□□□□□ -0.12
ACER3-201ENST00000278544 SOX5P35711 763 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 MLH1P40692 756 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 MAGEA1P43355 309 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 SNRPFP62306 86 aaKnown RBP14.32□□□□□ -0.12
ACER3-201ENST00000278544 ZNF569Q5MCW4 686 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 GPR88Q9GZN0 384 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 IPPQ9Y573 584 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 POMCP01189 267 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 CFHP08603 1231 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 TMEM132DQ14C87 1099 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 KCTD19Q17RG1 926 aaPredicted RBP14.32□□□□□ -0.12
ACER3-201ENST00000278544 ZNF699Q32M78 642 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 HELQQ8TDG4 1101 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 TSC1Q92574 1164 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 ADAM2Q99965 735 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
ACER3-201ENST00000278544 A0A1W2PQJ5 194 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 ATMINO43313 823 aaPredicted RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 PRIMPOLQ96LW4 560 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 STK33Q9BYT3 514 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 N4BP1O75113 896 aaKnown RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 PAK2Q13177 524 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 FIGNQ5HY92 759 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 LLGL2Q6P1M3 1020 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 PRDM5Q9NQX1 630 aaPredicted RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 HYOU1Q9Y4L1 999 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 ZSCAN12O43309 604 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 MCF2P10911 925 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 CKBP12277 381 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 ZSCAN20P17040 1043 aaPredicted RBP14.31□□□□□ -0.12
ACER3-201ENST00000278544 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 LPIN3Q9BQK8 851 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 SIX4Q9UIU6 781 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 MROH7Q68CQ1 1323 aa14.31□□□□□ -0.12
ACER3-201ENST00000278544 I3L4J1 428 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 PIK3R2O00459 728 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 SERPING1P05155 500 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 MMEP08473 750 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 MEA1Q16626 185 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 FANCGO15287 622 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 GNRH1P01148 92 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 CD19P15391 556 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 LPIN1Q14693 890 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 MBTPS1Q14703 1052 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 TMCO2Q7Z6W1 182 aaPredicted RBP14.3□□□□□ -0.12
ACER3-201ENST00000278544 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
ACER3-201ENST00000278544 JAKMIP2Q96AA8 810 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 NAA15Q9BXJ9 866 aaKnown RBP14.3□□□□□ -0.12
ACER3-201ENST00000278544 NFKBIZQ9BYH8 718 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 PCDHA13Q9Y5I0 950 aa14.3□□□□□ -0.12
ACER3-201ENST00000278544 GTPBP10A4D1E9 387 aaKnown RBP14.29□□□□□ -0.12
ACER3-201ENST00000278544 UPP2O95045 317 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 CSPG5O95196 566 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 ABCD1P33897 745 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 CLCN1P35523 988 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 MFAP3P55082 362 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 NOP9Q86U38 636 aaKnown RBP14.29□□□□□ -0.12
ACER3-201ENST00000278544 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 DPP3Q9NY33 737 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.29□□□□□ -0.12
ACER3-201ENST00000278544 TIMM13Q9Y5L4 95 aaPredicted RBP14.29□□□□□ -0.12
ACER3-201ENST00000278544 SNX9Q9Y5X1 595 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 V9GYY5 206 aaPredicted RBP14.29□□□□□ -0.12
ACER3-201ENST00000278544 CASTOR2A6NHX0 329 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 TNFAIP3P21580 790 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 CYP2C18P33260 490 aa14.29□□□□□ -0.12
ACER3-201ENST00000278544 NOP2P46087 812 aaKnown RBP14.29□□□□□ -0.12
ACER3-201ENST00000278544 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms