RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 GSTP1P09211 210 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 RAG1P15918 1043 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 GNAT2P19087 354 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 SSR1P43307 286 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 CLCN2P51788 898 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ZNF75DP51815 510 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 SEC24CP53992 1094 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 NKX6-1P78426 367 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 ADAM9Q13443 819 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PTK2BQ14289 1009 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 CCDC40Q4G0X9 1142 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 LRRC24Q50LG9 513 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 CCDC178Q5BJE1 867 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 LRRTM4Q86VH4 590 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 TTLL11Q8NHH1 800 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 HDAC2Q92769 488 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 PLPPR2Q96GM1 343 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 APIPQ96GX9 242 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MRPL9Q9BYD2 267 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 ARHGAP39Q9C0H5 1083 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 RNPEPQ9H4A4 650 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 KCNH3Q9ULD8 1083 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ANGEL1Q9UNK9 670 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 PCDH11XQ9BZA7 1347 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PCDH11YQ9BZA8 1340 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PDE2AO00408 941 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 TARSP26639 723 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 BAG6P46379 1132 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 TLE2Q04725 743 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 LBRQ14739 615 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 POLD3Q15054 466 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 POSTNQ15063 836 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 GRIK5Q16478 980 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 BROXQ5VW32 411 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ATL3Q6DD88 541 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 CCDC103Q8IW40 242 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MAP4K1Q92918 833 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MVB12AQ96EY5 273 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 TNIP3Q96KP6 325 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 CTAGE1Q96RT6 745 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 RC3H2Q9HBD1 1191 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 SAP30BPQ9UHR5 308 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 KCNJ14Q9UNX9 436 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 AP1G1O43747 822 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 KIAA0754O94854 1291 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 HSPD1P10809 573 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 CD247P20963 164 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 POLR2BP30876 1174 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 MAPK4P31152 587 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 KRT2P35908 639 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 USP8P40818 1118 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PPM1FP49593 454 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 ZNF132P52740 706 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ATXN1P54253 815 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 NAPAP54920 295 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ASIC1P78348 528 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MYL5Q02045 173 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 UBXN1Q04323 297 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 BLMHQ13867 455 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 KRT40Q6A162 431 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 DIS3L2Q8IYB7 885 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 KRT222Q8N1A0 295 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ANKK1Q8NFD2 765 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 SYTL5Q8TDW5 730 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 BSNDQ8WZ55 320 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 STAMQ92783 540 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 HOXB13Q92826 284 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 GTF3C6Q969F1 213 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ZNF622Q969S3 477 aaKnown RBP eCLIP3.16□□□□□ -1.9
HERC4-201ENST00000277817 C7orf26Q96N11 449 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 HS3ST6Q96QI5 342 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 USP28Q96RU2 1077 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PPP1R9BQ96SB3 815 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 P2RX7Q99572 595 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 XPO4Q9C0E2 1151 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 MMRN2Q9H8L6 949 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ARFGAP3Q9NP61 516 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 EXOC1Q9NV70 894 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 RMND1Q9NWS8 449 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 TMOD2Q9NZR1 351 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MYO1AQ9UBC5 1043 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 GUCA1BQ9UMX6 200 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.16□□□□□ -1.9
HERC4-201ENST00000277817 SH3TC1Q8TE82 1336 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ZNF532Q9HCE3 1301 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 A0A1W2PNR3 127 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 FAM170AA1A519 330 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 TMCO5BA8MYB1 307 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 WDR64B1ANS9 1081 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PSMA7O14818 248 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 BMP15O95972 392 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 CCDC175P0C221 793 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 NEFHP12036 1026 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 CCT6AP40227 531 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 LMAN1P49257 510 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PAPOLAP51003 745 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 GPLD1P80108 840 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PCDH1Q08174 1060 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 LRMPQ12912 555 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MTA1Q13330 715 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms