RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 GOLPH3Q9H4A6 298 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 PUF60Q9UHX1 559 aaKnown RBP13.03□□□□□ -0.32
SDE2-201ENST00000272091 SNX12Q9UMY4 172 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.32
SDE2-201ENST00000272091 PDE2AO00408 941 aaPredicted RBP13.02□□□□□ -0.32
SDE2-201ENST00000272091 TMEM253P0C7T8 217 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 WDR44Q5JSH3 913 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 JADE1Q6IE81 842 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 SCLT1Q96NL6 688 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.32
SDE2-201ENST00000272091 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 COG5Q9UP83 839 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 SAR1BQ9Y6B6 198 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 FRMPD3Q5JV73 1810 aa13.02□□□□□ -0.32
SDE2-201ENST00000272091 FTCDO95954 541 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.33
SDE2-201ENST00000272091 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
SDE2-201ENST00000272091 CDR2Q01850 454 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 SP3Q02447 781 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 TUBB2AQ13885 445 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 DUOXA2Q1HG44 320 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 TPCN2Q8NHX9 752 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 TUBB2BQ9BVA1 445 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
SDE2-201ENST00000272091 EPC1Q9H2F5 836 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 BRCA2P51587 3418 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 C17orf102A2RUQ5 167 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 EFCAB8A8MWE9 144 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 SEPT4O43236 478 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 IL18RAPO95256 599 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 CFHP08603 1231 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 SURF1Q15526 300 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 WHAMMP3Q1A5X7 153 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 COG1Q8WTW3 980 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 WNT8BQ93098 351 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 ALS2CR12Q96Q35 445 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.33
SDE2-201ENST00000272091 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.33
SDE2-201ENST00000272091 PHACTR2O75167 634 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 ERLIN2O94905 339 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 KRT5P13647 590 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 ZNF132P52740 706 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 MEI1Q5TIA1 1274 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 MMS19Q96T76 1030 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 GINS2Q9Y248 185 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
SDE2-201ENST00000272091 ABCB4P21439 1286 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 ASPAP45381 313 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 MNS1Q8NEH6 495 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 GCOM2Q9BZD3 368 aaPredicted RBP13.01□□□□□ -0.33
SDE2-201ENST00000272091 PACSIN2Q9UNF0 486 aaPredicted RBP13.01□□□□□ -0.33
SDE2-201ENST00000272091 SNX17Q15036 470 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 GNASQ5JWF2 1037 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 CCSAPQ6IQ19 270 aaPredicted RBP13.01□□□□□ -0.33
SDE2-201ENST00000272091 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 CREG2Q8IUH2 290 aa13.01□□□□□ -0.33
SDE2-201ENST00000272091 MROH7Q68CQ1 1323 aa13□□□□□ -0.33
SDE2-201ENST00000272091 NPTXRO95502 500 aa13□□□□□ -0.33
SDE2-201ENST00000272091 FTLP02792 175 aaPredicted RBP13□□□□□ -0.33
SDE2-201ENST00000272091 PDE6CP51160 858 aa13□□□□□ -0.33
SDE2-201ENST00000272091 POU5F1Q01860 360 aaKnown RBP13□□□□□ -0.33
SDE2-201ENST00000272091 SLC35G2Q8TBE7 412 aa13□□□□□ -0.33
SDE2-201ENST00000272091 CD99L2Q8TCZ2 262 aa13□□□□□ -0.33
SDE2-201ENST00000272091 FAM81BQ96LP2 452 aa13□□□□□ -0.33
SDE2-201ENST00000272091 OSBPL9Q96SU4 736 aa13□□□□□ -0.33
SDE2-201ENST00000272091 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
SDE2-201ENST00000272091 ANKRD62A6NC57 917 aa13□□□□□ -0.33
SDE2-201ENST00000272091 GRM5P41594 1212 aa13□□□□□ -0.33
SDE2-201ENST00000272091 APLP1P51693 650 aa13□□□□□ -0.33
SDE2-201ENST00000272091 GUCY2FP51841 1108 aa13□□□□□ -0.33
SDE2-201ENST00000272091 NAP1L1P55209 391 aaKnown RBP13□□□□□ -0.33
SDE2-201ENST00000272091 RBM10P98175 930 aaKnown RBP13□□□□□ -0.33
SDE2-201ENST00000272091 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
SDE2-201ENST00000272091 GDF6Q6KF10 455 aaPredicted RBP13□□□□□ -0.33
SDE2-201ENST00000272091 MTG1Q9BT17 334 aaPredicted RBP13□□□□□ -0.33
SDE2-201ENST00000272091 POLIQ9UNA4 740 aa13□□□□□ -0.33
SDE2-201ENST00000272091 RTN2O75298 545 aa13□□□□□ -0.33
SDE2-201ENST00000272091 TRPA1O75762 1119 aa13□□□□□ -0.33
SDE2-201ENST00000272091 TMEM191BP0C7N4 346 aa13□□□□□ -0.33
SDE2-201ENST00000272091 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
SDE2-201ENST00000272091 PRLRP16471 622 aa13□□□□□ -0.33
SDE2-201ENST00000272091 C7orf31Q8N865 590 aa13□□□□□ -0.33
SDE2-201ENST00000272091 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
SDE2-201ENST00000272091 RFFLQ8WZ73 363 aa13□□□□□ -0.33
SDE2-201ENST00000272091 CAPZA3Q96KX2 299 aa13□□□□□ -0.33
SDE2-201ENST00000272091 EHD2Q9NZN4 543 aa13□□□□□ -0.33
SDE2-201ENST00000272091 GTF2IRD1Q9UHL9 959 aa13□□□□□ -0.33
SDE2-201ENST00000272091 GRIN2DO15399 1336 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 GZMAP12544 262 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 TBXAS1P24557 533 aaPredicted RBP12.99□□□□□ -0.33
SDE2-201ENST00000272091 CXCR5P32302 372 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 CLEC16AQ2KHT3 1053 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 PSMB7Q99436 277 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 ZSWIM1Q9BR11 485 aa12.99□□□□□ -0.33
SDE2-201ENST00000272091 CHORDC1Q9UHD1 332 aaPredicted RBP12.99□□□□□ -0.33
SDE2-201ENST00000272091 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms