RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ANKRD13AQ8IZ07 590 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 EHD2Q9NZN4 543 aa17.68■□□□□ 0.42
PHRF1-201ENST00000264555 A0A0A6YYK5 440 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 H3BRJ5 948 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 PDGFRAP16234 1089 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 WDR75Q8IWA0 830 aaKnown RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 SNX9Q9Y5X1 595 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 CENPCQ03188 943 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 ZC3H18Q86VM9 953 aaKnown RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 LRRC71Q8N4P6 559 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 TMC2Q8TDI7 906 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 PDCD2LQ9BRP1 358 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 PACSIN1Q9BY11 444 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 CELF4Q9BZC1 486 aaKnown RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 Q9H521 79 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 F8VZ95 297 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 EIF3HO15372 352 aaKnown RBP eCLIP17.67■□□□□ 0.421e-7■■□□□ 12.8
PHRF1-201ENST00000264555 ZNF189O75820 626 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 PAMP19021 973 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 STX1BP61266 288 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 TAF1BQ53T94 588 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 OTOP1Q7RTM1 612 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 ZNF571Q7Z3V5 609 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 RBM15Q96T37 977 aaKnown RBP eCLIP17.67■□□□□ 0.423e-8■■■■□ 26.2
PHRF1-201ENST00000264555 ZSWIM1Q9BR11 485 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 AIPL1Q9NZN9 384 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 SUPT20HL2P0C7V6 817 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 CUL2Q13617 745 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 LRRC14Q15048 493 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 E2F5Q15329 346 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 MUM1L1Q5H9M0 696 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 CYP2W1Q8TAV3 490 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 KIAA1683Q9H0B3 1180 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 KCNQ5Q9NR82 932 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 PIN4Q9Y237 131 aaKnown RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 SLITRK3O94933 977 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 NAMPTP43490 491 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 MCUQ8NE86 351 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 FEZF2Q8TBJ5 459 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-201ENST00000264555 GRAMD1AQ96CP6 724 aa17.67■□□□□ 0.42
PHRF1-201ENST00000264555 SGPL1O95470 568 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 GZMAP12544 262 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 BMP6P22004 513 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 EPC2Q52LR7 807 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 DDX42Q86XP3 938 aaKnown RBP eCLIP17.66■□□□□ 0.42
PHRF1-201ENST00000264555 SLC5A5Q92911 643 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 CDH16O75309 829 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 PLCB4Q15147 1175 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 GPAT2Q6NUI2 795 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 ZFPM1Q8IX07 1006 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 FAM129AQ9BZQ8 928 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 S100BP04271 92 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-201ENST00000264555 THOC1Q96FV9 657 aaKnown RBP17.66■□□□□ 0.42
PHRF1-201ENST00000264555 VPS39Q96JC1 886 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 VPS33BQ9H267 617 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 VEGFAP15692 232 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-201ENST00000264555 SH2D4BQ5SQS7 431 aa17.66■□□□□ 0.42
PHRF1-201ENST00000264555 TPX2Q9ULW0 747 aaKnown RBP17.66■□□□□ 0.42
PHRF1-201ENST00000264555 COILP38432 576 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-201ENST00000264555 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 NIPA1Q7RTP0 329 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 SLC13A5Q86YT5 568 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-201ENST00000264555 CYP3A4P08684 503 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 WEE2P0C1S8 567 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 LCP1P13796 627 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 AP1B1Q10567 949 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 NME3Q13232 169 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 KLC3Q6P597 504 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 GPRC5AQ8NFJ5 357 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 ACTRT1Q8TDG2 376 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 L1RE1Q9UN81 338 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 CASQ2O14958 399 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-201ENST00000264555 FNTAP49354 379 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 DDX23Q9BUQ8 820 aaKnown RBP17.65■□□□□ 0.42
PHRF1-201ENST00000264555 FAM96AQ9H5X1 160 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 MEA1Q16626 185 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 MFSD14CQ5VZR4 134 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 ITPRIPL1Q6GPH6 555 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 OR2W6PQ8NHA6 318 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 GBP5Q96PP8 586 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 NT5C1AQ9BXI3 368 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 ROPN1BQ9BZX4 212 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-201ENST00000264555 ROPN1Q9HAT0 212 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-201ENST00000264555 FGFR1OP2Q9NVK5 253 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 NEU2Q9Y3R4 380 aa17.65■□□□□ 0.42
PHRF1-201ENST00000264555 MX2P20592 715 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 PLA2G4AP47712 749 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 SCN4BQ8IWT1 228 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 APPL2Q8NEU8 664 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 TRIM62Q9BVG3 475 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 BFARQ9NZS9 450 aa17.64■□□□□ 0.42
PHRF1-201ENST00000264555 DYNC1LI2O43237 492 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-201ENST00000264555 CYP11B1P15538 503 aa17.64■□□□□ 0.41
PHRF1-201ENST00000264555 NCF2P19878 526 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-201ENST00000264555 LRRC31Q6UY01 552 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms