RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 DNAJB1P25685 340 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 LRPAP1P30533 357 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 MORC3Q14149 939 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 EDRF1Q3B7T1 1238 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 USP41Q3LFD5 358 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 SPATA1Q5VX52 437 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 TMEM173Q86WV6 379 aaPredicted RBP20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 SMYD4Q8IYR2 804 aaPredicted RBP20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 ANKRD36BP1Q96IX9 119 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 HERC2P3Q9BVR0 1158 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 GOLGA2P5Q9HBQ8 144 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 MRPL17Q9NRX2 175 aaKnown RBP20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 BICDL2A1A5D9 508 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 BIN1O00499 593 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 MEFVO15553 781 aaPredicted RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 KIF4AO95239 1232 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 NFICP08651 508 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 NR2F2P24468 414 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 GLUD2P49448 558 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 ERVFC1P60507 584 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 TFAMQ00059 246 aaKnown RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 CREMQ03060 361 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 LRRC63Q05C16 580 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 SOX4Q06945 474 aaPredicted RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 ADAM9Q13443 819 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 SKIV2LQ15477 1246 aaKnown RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 CCDC85BQ15834 202 aaPredicted RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 PLPP4Q5VZY2 271 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 CEP135Q66GS9 1140 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 CBWD2Q8IUF1 395 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 ADSSL1Q8N142 457 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 RABGGTAQ92696 567 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 CDCA3Q99618 268 aaPredicted RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 PAAF1Q9BRP4 392 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 ZBP1Q9H171 429 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 DMAC2Q9NW81 257 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 DPP3Q9NY33 737 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 TUBGCP4Q9UGJ1 667 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 VWA8A3KMH1 1905 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 SCN1AP35498 2009 aa20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 MTCL1Q9Y4B5 1905 aaKnown RBP20.29■□□□□ 0.84
CYSTM1-201ENST00000261811 ARHGEF37A1IGU5 675 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 FSCN2O14926 492 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 CETN3O15182 167 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 TNNC2P02585 160 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 TNNI1P19237 187 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 MCM4P33991 863 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 CAMK1Q14012 370 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 DUOXA2Q1HG44 320 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 CENPPQ6IPU0 288 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 WDR49Q8IV35 697 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 GPR65Q8IYL9 337 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 MRPL43Q8N983 215 aaKnown RBP20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 ZSWIM2Q8NEG5 633 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 HASPINQ8TF76 798 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 BCL7CQ8WUZ0 217 aaPredicted RBP20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 EMILIN2Q9BXX0 1053 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 TLE6Q9H808 572 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 PDE11AQ9HCR9 933 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 CACNG4Q9UBN1 327 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 IRAK3Q9Y616 596 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 CDH23Q9H251 3354 aa20.28■□□□□ 0.84
CYSTM1-201ENST00000261811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 MAPK13O15264 365 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 SRGAP2BP0DMP2 458 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 PSMC2P35998 433 aaKnown RBP20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 CYP24A1Q07973 514 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 PSMD6Q15008 389 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 GPT2Q8TD30 523 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 SYAP1Q96A49 352 aaPredicted RBP20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 MFSD14AQ96MC6 490 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 DACH1Q9UI36 760 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 ITGA11Q9UKX5 1188 aa20.27■□□□□ 0.84
CYSTM1-201ENST00000261811 DLATP10515 647 aaKnown RBP20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 KRT13P13646 458 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 CCNE1P24864 410 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 IRS1P35568 1242 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 PNPLA4P41247 253 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 AP3M2P53677 418 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 FKBP3Q00688 224 aaKnown RBP20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 TCEAL5Q5H9L2 206 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 FAM171A1Q5VUB5 890 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 CEP57Q86XR8 500 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 CCDC127Q96BQ5 260 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 ZNF560Q96MR9 790 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 TTPALQ9BTX7 342 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 GPR62Q9BZJ7 368 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 INTS13Q9NVM9 706 aa20.27■□□□□ 0.83
CYSTM1-201ENST00000261811 F8W810 466 aa20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 EPB41P11171 864 aaKnown RBP20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 DSG1Q02413 1049 aa20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 C9orf57Q5W0N0 161 aa20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 KLHL10Q6JEL2 608 aa20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 INTS8Q75QN2 995 aaKnown RBP20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 PPFIBP1Q86W92 1011 aa20.26■□□□□ 0.83
CYSTM1-201ENST00000261811 EFCAB13Q8IY85 973 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms