RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NDE1Q9NXR1 346 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 CHORDC1Q9UHD1 332 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 AGLP35573 1532 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 HSD17B4P51659 736 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 LRRC71Q8N4P6 559 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 TRIM45Q9H8W5 580 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 MARCOQ9UEW3 520 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 CNOT7Q9UIV1 285 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PJA2O43164 708 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 APRTP07741 180 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 IL31Q6EBC2 164 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 ADCK2Q7Z695 626 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 RCOR2Q8IZ40 523 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SENP7Q9BQF6 1050 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 OSBPL1AQ9BXW6 950 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 NPHS2Q9NP85 383 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 MYO1CO00159 1063 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 ETFBP38117 255 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 DPYDQ12882 1025 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 NCOA4Q13772 614 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SPATA4Q8NEY3 305 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 MTBPQ96DY7 904 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 RUBCNLQ9H714 662 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 MRPL40Q9NQ50 206 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PCMTD2Q9NV79 361 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 A0A1W2PQC6 194 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PDGFRAP16234 1089 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 HMOX2P30519 316 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PPP3CCP48454 512 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 VSNL1P62760 191 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SMTNL2Q2TAL5 461 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 B4GALNT2Q8NHY0 566 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SH3TC2Q8TF17 1288 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PABPC5Q96DU9 382 aaKnown RBP12.73□□□□□ -0.37
COL8A1-201ENST00000261037 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
COL8A1-201ENST00000261037 NDUFB10O96000 172 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 C6orf222P0C671 652 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-201ENST00000261037 CYP2B6P20813 491 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 MAGEA9P43362 315 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ACTR2P61160 394 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 RAD51Q06609 339 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ZBTB17Q13105 803 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 TEDDM1Q5T9Z0 273 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 MFN1Q8IWA4 741 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 C4orf33Q8N1A6 199 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-201ENST00000261037 FHOD1Q9Y613 1164 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 PFASO15067 1338 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 C1orf167Q5SNV9 1468 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 AKT1P31749 480 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 FMO5P49326 533 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 LRRC23Q53EV4 343 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-201ENST00000261037 SH2D3CQ8N5H7 860 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 OR2W6PQ8NHA6 318 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ASAP3Q8TDY4 903 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 YY1AP1Q9H869 796 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 PHF2O75151 1096 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 COG2Q14746 738 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 KYAT1Q16773 422 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 EPC2Q52LR7 807 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 ZNF70Q9UC06 446 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-201ENST00000261037 KCNH4Q9UQ05 1017 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 CRB1P82279 1406 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 hCG_2014768A0A024R1R8 64 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 MYMKA6NI61 221 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 CYBBP04839 570 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 CHN1P15882 459 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 SLC1A1P43005 524 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 GALCP54803 685 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 EXOSC10Q01780 885 aaKnown RBP12.72□□□□□ -0.37
COL8A1-201ENST00000261037 GOLGA7BQ2TAP0 167 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 GJB7Q6PEY0 223 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 SLC24A3Q9HC58 644 aa12.72□□□□□ -0.37
COL8A1-201ENST00000261037 MAP4P27816 1152 aaKnown RBP12.71□□□□□ -0.37
COL8A1-201ENST00000261037 NUMBP49757 651 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 RBP5P82980 135 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 PRKCEQ02156 737 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 KCNB1Q14721 858 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms