RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 KIF20AO95235 890 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 EFEMP2O95967 443 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 ZBTB6Q15916 424 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 UPP1Q16831 310 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 PLPP4Q5VZY2 271 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 DCLRE1AQ6PJP8 1040 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 GPD1LQ8N335 351 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 ERCC4Q92889 916 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-201ENST00000260130 SMARCE1Q969G3 411 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 PPP2R3CQ969Q6 453 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 DDX27Q96GQ7 796 aaKnown RBP18.19■□□□□ 0.5
SDCBP-201ENST00000260130 ZBP1Q9H171 429 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 HSPBP1Q9NZL4 362 aa18.19■□□□□ 0.5
SDCBP-201ENST00000260130 CLIC2O15247 247 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 SKIV2LQ15477 1246 aaKnown RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 UBQLN1Q9UMX0 589 aaKnown RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 B3GAT3O94766 335 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 KIF4AO95239 1232 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 CXCL14O95715 111 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 SOD2P04179 222 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 CTSAP10619 480 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 SMC1AQ14683 1233 aaKnown RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 JADE1Q6IE81 842 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 FUT10Q6P4F1 479 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 ADGRD2Q7Z7M1 963 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 GOLGA5Q8TBA6 731 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 HASPINQ8TF76 798 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
SDCBP-201ENST00000260130 KIAA1586Q9HCI6 787 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 XIRP2A4UGR9 3374 aa18.18■□□□□ 0.5
SDCBP-201ENST00000260130 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
SDCBP-201ENST00000260130 IL18RAPO95256 599 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 CYP3A5P20815 502 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 C12orf56Q8IXR9 622 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 RNF168Q8IYW5 571 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-201ENST00000260130 GPR62Q9BZJ7 368 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 KCTD10Q9H3F6 313 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 RBAKQ9NYW8 714 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-201ENST00000260130 TUBGCP4Q9UGJ1 667 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 DERAQ9Y315 318 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 SPTBN5Q9NRC6 3674 aaKnown RBP18.17■□□□□ 0.5
SDCBP-201ENST00000260130 HIDE1A8MVS5 230 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 TMEM189-UBE2V1I3L0A0 370 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 PODXLO00592 558 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 TYRO3Q06418 890 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 RBM23Q86U06 439 aaKnown RBP18.17■□□□□ 0.5
SDCBP-201ENST00000260130 BRSK2Q8IWQ3 736 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 GUF1Q8N442 669 aaKnown RBP18.17■□□□□ 0.5
SDCBP-201ENST00000260130 HERC2P3Q9BVR0 1158 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 TLE6Q9H808 572 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 MAPK8IP1Q9UQF2 711 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 IRAK3Q9Y616 596 aa18.17■□□□□ 0.5
SDCBP-201ENST00000260130 SF3B1O75533 1304 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■■■ 66.8
SDCBP-201ENST00000260130 C2orf71A6NGG8 1288 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 ZNF233A6NK53 670 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 PDXKO00764 312 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 IGFBP6P24592 240 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-201ENST00000260130 CA8P35219 290 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 HYAL1Q12794 435 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 TMEM132DQ14C87 1099 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 XXYLT1Q8NBI6 393 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 AUTS2Q8WXX7 1259 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 FBXL18Q96ME1 805 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 C2CD2Q9Y426 696 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 CITO14578 2027 aa18.16■□□□□ 0.5
SDCBP-201ENST00000260130 NCK2O43639 380 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 NFICP08651 508 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 NRIP1P48552 1158 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 CYP2J2P51589 502 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 ZNF658Q5TYW1 1059 aaPredicted RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 SPATA1Q5VX52 437 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 C3orf58Q8NDZ4 430 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 GTPBP4Q9BZE4 634 aaKnown RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 IGFLR1Q9H665 355 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 MRPL17Q9NRX2 175 aaKnown RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 CHST7Q9NS84 486 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 MYO7AQ13402 2215 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 TULP1O00294 542 aaPredicted RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 PER2O15055 1255 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 AP5Z1O43299 807 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 LRPAP1P30533 357 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 ELAVL2Q12926 359 aaKnown RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 USP41Q3LFD5 358 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 CD300LGQ6UXG3 332 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 RBM43Q6ZSC3 357 aaKnown RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 NT5DC4Q86YG4 428 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 CBWD2Q8IUF1 395 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 SMYD4Q8IYR2 804 aaPredicted RBP18.15■□□□□ 0.5
SDCBP-201ENST00000260130 RDH13Q8NBN7 331 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 BEST2Q8NFU1 509 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 SSX2IPQ9Y2D8 614 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
SDCBP-201ENST00000260130 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-201ENST00000260130 URODP06132 367 aa18.14■□□□□ 0.49
SDCBP-201ENST00000260130 WNT7BP56706 349 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms