RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 HPDLQ96IR7 371 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 WNT8AQ9H1J5 351 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 UVRAGQ9P2Y5 699 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 CNOT8Q9UFF9 292 aaKnown RBP14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 ZNF541Q9H0D2 1346 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 AKAP12Q02952 1782 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 GCLMP48507 274 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 TAF11Q15544 211 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 SH2D4BQ5SQS7 431 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 ANKS3Q6ZW76 656 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 PODXLO00592 558 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 COBLO75128 1261 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 ALDH1A2O94788 518 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 PPP2R5CQ13362 524 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.13
PRPF38A-201ENST00000257181 VDRP11473 427 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 P3H1Q32P28 736 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 ATP6V1E2Q96A05 226 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 DNPEPQ9ULA0 475 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 SF3B1O75533 1304 aaKnown RBP eCLIP14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 A0A0G2JLL6 359 aaPredicted RBP14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 MYMKA6NI61 221 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 SEPT4O43236 478 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 NCK2O43639 380 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 LRRN2O75325 713 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 ASGR1P07306 291 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 PSEN1P49768 467 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 CRYBB1P53674 252 aaPredicted RBP14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 PDE1BQ01064 536 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 ZNF177Q13360 481 aaPredicted RBP14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 PRRT2Q7Z6L0 340 aaPredicted RBP14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 RHOT1Q8IXI2 618 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 CGRRF1Q99675 332 aa14.21□□□□□ -0.14
PRPF38A-201ENST00000257181 A0A087WZ62 844 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 CSPG5O95196 566 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 CKBP12277 381 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 DEFB128Q7Z7B8 93 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 IFNL1Q8IU54 200 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 PPTC7Q8NI37 304 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 EPSTI1Q96J88 318 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 SPATA16Q9BXB7 569 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 FAM124BQ9H5Z6 455 aaPredicted RBP14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 GIT1Q9Y2X7 761 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 FLT3LGP49771 235 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 WASHC5Q12768 1159 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 TLR2O60603 784 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 LGALS2P05162 132 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 ATXN3P54252 364 aaPredicted RBP14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 AP1B1Q10567 949 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 TROAPQ12815 778 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 SYDE1Q6ZW31 735 aaPredicted RBP14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 PDIK1LQ8N165 341 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 F5H5T6 163 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 MBL2P11226 248 aaPredicted RBP14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 CTNNB1P35222 781 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 STX1BP61266 288 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 DUSP28Q4G0W2 176 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 HEATR6Q6AI08 1181 aaKnown RBP14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 SLC5A5Q92911 643 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 L3MBTL3Q96JM7 780 aaPredicted RBP14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 ELOVL4Q9GZR5 314 aa14.2□□□□□ -0.14
PRPF38A-201ENST00000257181 LRP6O75581 1613 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 FAM102AQ5T9C2 384 aaPredicted RBP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 TIGD7Q6NT04 549 aaPredicted RBP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 SAGE1Q9NXZ1 904 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 SEC24BO95487 1268 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 INSRRP14616 1297 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 YWHAGP61981 247 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 CCDC62Q6P9F0 684 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 RNF10Q8N5U6 811 aaKnown RBP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 TLDC2A0PJX2 215 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 SFI1A8K8P3 1242 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 APOL1O14791 398 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 TLL1O43897 1013 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 RTN2O75298 545 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 ZRANB2O95218 330 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 AARSP49588 968 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 BCAT1P54687 386 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 CENPUQ71F23 418 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 ADAT2Q7Z6V5 191 aaKnown RBP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 FAM133AQ8N9E0 248 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 HSPH1Q92598 858 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 VPS50Q96JG6 964 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 DEFB118Q96PH6 123 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 STK33Q9BYT3 514 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 MUC3BQ9H195 1237 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 TLL2Q9Y6L7 1015 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 PIK3C2AO00443 1686 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 SMIM35A0A1B0GVV1 85 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 TCRBV5S4A2TA0A5A2 114 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 IGFBP4P22692 258 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 CYP4F22Q6NT55 531 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 ALKBH5Q6P6C2 394 aaKnown RBP14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 SYT10Q6XYQ8 523 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 FRA10AC1Q70Z53 315 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 NLGN2Q8NFZ4 835 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms