RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
VPS25-201ENST00000253794 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 ANKRD36BP1Q96IX9 119 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 CBX8Q9HC52 389 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 SAMSN1Q9NSI8 373 aaKnown RBP15.26■□□□□ 0.03
VPS25-201ENST00000253794 HCSTQ9UBK5 93 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 DNAJB4Q9UDY4 337 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 TUBGCP4Q9UGJ1 667 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 ITGA11Q9UKX5 1188 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 GBF1Q92538 1859 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 TMEM265A0A087WTH1 108 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 PIRO00625 290 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 EFEMP2O95967 443 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
VPS25-201ENST00000253794 TMEM191BP0C7N4 346 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 MYOGP15173 224 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 TNNI1P19237 187 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 DNAJB2P25686 324 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 PPM1AP35813 382 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 SLC11A1P49279 550 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 BCAR1P56945 870 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 ERVK-21P61565 698 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 TAP1Q03518 808 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 SPAG1Q07617 926 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 ZACNQ401N2 412 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 KCNT2Q6UVM3 1135 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 TRAPPC11Q7Z392 1133 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 COLGALT1Q8NBJ5 622 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 ZNF558Q96NG5 402 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 FAM193BQ96PV7 902 aaPredicted RBP15.25■□□□□ 0.03
VPS25-201ENST00000253794 POP1Q99575 1024 aaKnown RBP15.25■□□□□ 0.03
VPS25-201ENST00000253794 MTMR12Q9C0I1 747 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 TMEM8AQ9HCN3 771 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 AAASQ9NRG9 546 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 FANCLQ9NW38 375 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 DPP3Q9NY33 737 aa15.25■□□□□ 0.03
VPS25-201ENST00000253794 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 LRRC10BA6NIK2 292 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 NRP1O14786 923 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 P4HA2O15460 535 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 ZC3H11AO75152 810 aaKnown RBP eCLIP15.24■□□□□ 0.03
VPS25-201ENST00000253794 STAU1O95793 577 aaKnown RBP15.24■□□□□ 0.03
VPS25-201ENST00000253794 TNNC2P02585 160 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 ALDH2P05091 517 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 RB1P06400 928 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 BMPR1AP36894 532 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 ALDH7A1P49419 539 aaKnown RBP15.24■□□□□ 0.03
VPS25-201ENST00000253794 AARSP49588 968 aaKnown RBP eCLIP15.24■□□□□ 0.03
VPS25-201ENST00000253794 TFAMQ00059 246 aaKnown RBP15.24■□□□□ 0.03
VPS25-201ENST00000253794 PPP3CAQ08209 521 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 TCP11X2Q5H9J9 407 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 C9orf57Q5W0N0 161 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 DCLRE1AQ6PJP8 1040 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 SLC39A11Q8N1S5 342 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 LRRC52Q8N7C0 313 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 TGS1Q96RS0 853 aaKnown RBP15.24■□□□□ 0.03
VPS25-201ENST00000253794 GOLGA2P5Q9HBQ8 144 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 MARCH5Q9NX47 278 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 STK39Q9UEW8 545 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 COQ4Q9Y3A0 265 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 KIAA1671Q9BY89 1806 aa15.24■□□□□ 0.03
VPS25-201ENST00000253794 CASTOR2A6NHX0 329 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 BECN2A8MW95 431 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 KCNJ18B7U540 433 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 PODXLO00592 558 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 TRIM49P0CI25 452 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 TRIM49CP0CI26 452 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 CLCNKBP51801 687 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 PLCB3Q01970 1234 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 KCNJ12Q14500 433 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 MAN2A1Q16706 1144 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 TDRD10Q5VZ19 366 aaKnown RBP15.23■□□□□ 0.03
VPS25-201ENST00000253794 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
VPS25-201ENST00000253794 KRT39Q6A163 491 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 CD300LGQ6UXG3 332 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 SV2AQ7L0J3 742 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
VPS25-201ENST00000253794 TIFAQ96CG3 184 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 NKX2-4Q9H2Z4 354 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 VRTNQ9H8Y1 702 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 MAGEC2Q9UBF1 373 aaPredicted RBP15.23■□□□□ 0.03
VPS25-201ENST00000253794 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
VPS25-201ENST00000253794 FAN1Q9Y2M0 1017 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 PCDHB12Q9Y5F1 795 aa15.23■□□□□ 0.03
VPS25-201ENST00000253794 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.23■□□□□ 0.03
VPS25-201ENST00000253794 N4BP1O75113 896 aaKnown RBP15.22■□□□□ 0.03
VPS25-201ENST00000253794 VNN1O95497 513 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 AFPP02771 609 aaKnown RBP15.22■□□□□ 0.03
VPS25-201ENST00000253794 ITGB3P05106 788 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 PNPLA4P41247 253 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 OR1G1P47890 313 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 GCLMP48507 274 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 FMO5P49326 533 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms