RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TOB1P50616 345 aaPredicted RBP11.35□□□□□ -0.59
VPS50-201ENST00000251739 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
VPS50-201ENST00000251739 RAB33AQ14088 237 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 ANGPT1Q15389 498 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 XKR4Q5GH76 650 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 PHLDB3Q6NSJ2 640 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 RSPO2Q6UXX9 243 aaPredicted RBP11.35□□□□□ -0.59
VPS50-201ENST00000251739 THSD4Q6ZMP0 1018 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 GET4Q7L5D6 327 aaPredicted RBP11.35□□□□□ -0.59
VPS50-201ENST00000251739 TAS1R3Q7RTX0 852 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 C3orf58Q8NDZ4 430 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 DEPTORQ8TB45 409 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 KIFAP3Q92845 792 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 PIDD1Q9HB75 910 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 PTPRHQ9HD43 1115 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 ARHGAP28Q9P2N2 729 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 TNFSF13BQ9Y275 285 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 NUMBLQ9Y6R0 609 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 PHLPP2Q6ZVD8 1323 aa11.35□□□□□ -0.59
VPS50-201ENST00000251739 NCOR2Q9Y618 2525 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 C8AP07357 584 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 PROZP22891 400 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 FSHRP23945 695 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 CCT6AP40227 531 aaKnown RBP11.34□□□□□ -0.59
VPS50-201ENST00000251739 NTHL1P78549 312 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
VPS50-201ENST00000251739 MAPK7Q13164 816 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 PDIA5Q14554 519 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 LIN9Q5TKA1 542 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 ATF7IP2Q5U623 682 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 PDXDC1Q6P996 788 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 ALKAL1Q6UXT8 129 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 CEP120Q8N960 986 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 GPR152Q8TDT2 470 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 FGF14Q92915 247 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 CDT1Q9H211 546 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 TBC1D17Q9HA65 648 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 POLD4Q9HCU8 107 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 LRWD1Q9UFC0 647 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 CDH7Q9ULB5 785 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 KIAA1024Q9UPX6 916 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 GDAQ9Y2T3 454 aa11.34□□□□□ -0.59
VPS50-201ENST00000251739 TSC2P49815 1807 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 SMIM28A0A1B0GU29 152 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 OR1D2P34982 312 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 GRM5P41594 1212 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 NPTX2P47972 431 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 CLCNKBP51801 687 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 IL17AQ16552 155 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 UPP1Q16831 310 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 UVSSAQ2YD98 709 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 GLRA4Q5JXX5 417 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 PARM1Q6UWI2 310 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 RTL10Q7L3V2 364 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 GRASPQ7Z6J2 395 aaPredicted RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 SLC7A14Q8TBB6 771 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 FGF13Q92913 245 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 NKD2Q969F2 451 aaPredicted RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 IFT74Q96LB3 600 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 ZSCAN31Q96LW9 406 aaPredicted RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 UROC1Q96N76 676 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 ACO2Q99798 780 aaKnown RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 MMTAG2Q9BU76 263 aaKnown RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 DDX23Q9BUQ8 820 aaKnown RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 GOLGA2P5Q9HBQ8 144 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 SH2B1Q9NRF2 756 aaPredicted RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 DDX19AQ9NUU7 478 aaKnown RBP11.33□□□□□ -0.6
VPS50-201ENST00000251739 CA14Q9ULX7 337 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 ANK1P16157 1881 aa11.33□□□□□ -0.6
VPS50-201ENST00000251739 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 TBC1D4O60343 1298 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 XYLBO75191 536 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 B3GAT3O94766 335 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 KCNE1P15382 129 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 LIG1P18858 919 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 TKTP29401 623 aaKnown RBP11.32□□□□□ -0.6
VPS50-201ENST00000251739 CLCN1P35523 988 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 PRPHP41219 470 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 TMEM132AQ24JP5 1023 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 PPM1LQ5SGD2 360 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 AXDND1Q5T1B0 1012 aaPredicted RBP11.32□□□□□ -0.6
VPS50-201ENST00000251739 SLC8B1Q6J4K2 584 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 KCNK18Q7Z418 384 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 CEP57Q86XR8 500 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 SNX27Q96L92 541 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
VPS50-201ENST00000251739 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
VPS50-201ENST00000251739 NOL7Q9UMY1 257 aaKnown RBP11.32□□□□□ -0.6
VPS50-201ENST00000251739 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms