RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 VSTM1Q6UX27 236 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 PIGWQ7Z7B1 504 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 MCOLN2Q8IZK6 566 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 TMEM109Q9BVC6 243 aa10.8□□□□□ -0.68
COPB1-201ENST00000249923 MOV10L1Q9BXT6 1211 aaKnown RBP10.8□□□□□ -0.68
COPB1-201ENST00000249923 PODXLO00592 558 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 RWDD2BP57060 319 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 NLRP11P59045 1033 aaKnown RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 TAS2R40P59535 323 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 CLDN10P78369 228 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 DMP1Q13316 513 aaPredicted RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 NEDD9Q14511 834 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 VSIG10LQ86VR7 867 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 GLIS1Q8NBF1 620 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 ELAC2Q9BQ52 826 aaKnown RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 RPAP3Q9H6T3 665 aaPredicted RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 SLC40A1Q9NP59 571 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 MYOZ2Q9NPC6 264 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 KMT5AQ9NQR1 393 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 ANKEF1Q9NU02 776 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 GEMIN8Q9NWZ8 242 aaKnown RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 UVRAGQ9P2Y5 699 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 TTLL13PA6NNM8 815 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 ACSL3O95573 720 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 GGPS1O95749 300 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 GH1P01241 217 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 FDX1P10109 184 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 SCTRP47872 440 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 CNGA2Q16280 664 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 CAPN12Q6ZSI9 719 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 MCF2L2Q86YR7 1114 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 SAMD3Q8N6K7 520 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 TMC2Q8TDI7 906 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 ZBTB45Q96K62 511 aaPredicted RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 ARHGAP28Q9P2N2 729 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 LOC285556D6RIA3 1793 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 ENO4A6NNW6 628 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 PEX10O60683 326 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 CYP1A1P04798 512 aaPredicted RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 DPEP1P16444 411 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 HSPA6P17066 643 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 GJC1P36383 396 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 SNRPFP62306 86 aaKnown RBP10.79□□□□□ -0.68
COPB1-201ENST00000249923 SP4Q02446 784 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 GCNT1Q02742 428 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 PTP4A2Q12974 167 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 HOOK3Q86VS8 718 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 NT5C1BQ96P26 610 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 RASAL2Q9UJF2 1139 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 MGAMO43451 1857 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 DOCK1Q14185 1865 aa10.79□□□□□ -0.68
COPB1-201ENST00000249923 HNRNPDLO14979 420 aaKnown RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 CHUKO15111 745 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 KRT5P13647 590 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 JAK3P52333 1124 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 MFSD5Q6N075 450 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 SEPT14Q6ZU15 432 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 PASD1Q8IV76 773 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 KIF2BQ8N4N8 673 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 TTLL6Q8N841 843 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 SPIRE2Q8WWL2 714 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 LPAR1Q92633 364 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 CNOT10Q9H9A5 744 aaKnown RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.681e-34■■■■□ 19.8
COPB1-201ENST00000249923 L3MBTL1Q9Y468 752 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 GSTTP1A0A1W2PQM5 241 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 RGS16O15492 202 aaPredicted RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 ECEL1O95672 775 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 OAS1P00973 400 aaKnown RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 C4BPAP04003 597 aaKnown RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 ACOT2P49753 483 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 SMTNP53814 917 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 LACTB2Q53H82 288 aaPredicted RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 SWSAP1Q6NVH7 229 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 TIPINQ9BVW5 301 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 HEMGNQ9BXL5 484 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 CCDC134Q9H6E4 229 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 ZNRF3Q9ULT6 936 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 AGTP01019 485 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 NR3C2P08235 984 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 SESN3P58005 492 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 KRT76Q01546 638 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 CENPCQ03188 943 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 ZNF252P-AS1Q0IIN9 211 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 TNIP1Q15025 636 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 ATP13A4Q4VNC1 1196 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 SGO2Q562F6 1265 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 ARHGEF16Q5VV41 709 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 FUKQ8N0W3 1084 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 GPD1LQ8N335 351 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 AGBL3Q8NEM8 1001 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 MORC4Q8TE76 937 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 VTI1AQ96AJ9 217 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 SENP7Q9BQF6 1050 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms