RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 RARAP10276 462 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 NR1D1P20393 614 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 ICAM3P32942 547 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 NSFP46459 744 aaKnown RBP16.84■□□□□ 0.29
LRFN1-201ENST00000248668 CCT5P48643 541 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
LRFN1-201ENST00000248668 ZNF844Q08AG5 666 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 TRIP13Q15645 432 aaPredicted RBP16.84■□□□□ 0.29
LRFN1-201ENST00000248668 GJC2Q5T442 439 aaPredicted RBP16.84■□□□□ 0.29
LRFN1-201ENST00000248668 NLRP4Q96MN2 994 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 HEMGNQ9BXL5 484 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 RAB17Q9H0T7 212 aa16.84■□□□□ 0.29
LRFN1-201ENST00000248668 H0YCG3 227 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 CST3P01034 146 aaPredicted RBP16.83■□□□□ 0.29
LRFN1-201ENST00000248668 HADHBP55084 474 aaKnown RBP16.83■□□□□ 0.29
LRFN1-201ENST00000248668 IGBP1P78318 339 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 MCOLN2Q8IZK6 566 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 CD101Q93033 1021 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 ATP6V1G3Q96LB4 118 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 MTMR12Q9C0I1 747 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 WNT8AQ9H1J5 351 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 FAM114A2Q9NRY5 505 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 KLHL11Q9NVR0 708 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 DIS3Q9Y2L1 958 aaKnown RBP16.83■□□□□ 0.29
LRFN1-201ENST00000248668 ARID2Q68CP9 1835 aa16.83■□□□□ 0.29
LRFN1-201ENST00000248668 MYPNQ86TC9 1320 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 DCDC2CA8MYV0 355 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 THAP12O43422 761 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 PHF2O75151 1096 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 MYZAPP0CAP1 466 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 GNA15P30679 374 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 IFFO1Q0D2I5 559 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 CUL2Q13617 745 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 ODF2Q5BJF6 829 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 CCDC25Q86WR0 208 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 RHPN2Q8IUC4 686 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 SEPT1Q8WYJ6 367 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 RPS6KC1Q96S38 1066 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 CEP89Q96ST8 783 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 PCDHB2Q9Y5E7 798 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 MYO1FO00160 1098 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 RPL21P46778 160 aaKnown RBP16.83■□□□□ 0.28
LRFN1-201ENST00000248668 VPS41P49754 854 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 RWDD2BP57060 319 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 NCOA4Q13772 614 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 SLC13A5Q86YT5 568 aaPredicted RBP16.83■□□□□ 0.28
LRFN1-201ENST00000248668 PPM1EQ8WY54 764 aa16.83■□□□□ 0.28
LRFN1-201ENST00000248668 ZNFX1Q9P2E3 1918 aaKnown RBP16.82■□□□□ 0.28
LRFN1-201ENST00000248668 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 A0A0B4J269 797 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 UNGP13051 313 aaPredicted RBP16.82■□□□□ 0.28
LRFN1-201ENST00000248668 KRT71Q3SY84 523 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 DUPD1Q68J44 220 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 MMS22LQ6ZRQ5 1243 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 CEP120Q8N960 986 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 TLDC2A0PJX2 215 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 NEDD9Q14511 834 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 ZFYVE27Q5T4F4 411 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
LRFN1-201ENST00000248668 HERPUD2Q9BSE4 406 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 CXorf56Q9H5V9 222 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 KIAA1586Q9HCI6 787 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
LRFN1-201ENST00000248668 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
LRFN1-201ENST00000248668 H0YGN5 161 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 ADCY3O60266 1144 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 CORO7P57737 925 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 FAM160B1Q5W0V3 765 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 PCDHA3Q9Y5H8 950 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 NFS1Q9Y697 457 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 B4GALT5O43286 388 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 SHBGP04278 402 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 ACO1P21399 889 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 PTGIRP43119 386 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 MNAT1P51948 309 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 SLFN12LQ6IEE8 588 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 METTL7BQ6UX53 244 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 NIFKQ9BYG3 293 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 TMBIM4Q9HC24 238 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 ADAM22Q9P0K1 906 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 INO80B-WBP1J3KQ70 363 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 SHOX2O60902 331 aaPredicted RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 IREB2P48200 963 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 LIG3P49916 1009 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 CLCN3P51790 818 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 SPATA33Q96N06 139 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 ADARB2Q9NS39 739 aaKnown RBP16.81■□□□□ 0.28
LRFN1-201ENST00000248668 CNTNAP2Q9UHC6 1331 aa16.81■□□□□ 0.28
LRFN1-201ENST00000248668 IGKV6D-21A0A0A0MT36 114 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 BHMG1C9JSJ3 638 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms