RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 POLR2MP0CAP2 368 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 SKIV2L2P42285 1042 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 ITGA8P53708 1063 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 MRPS9P82933 396 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 MTFR1Q15390 333 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 STXBP4Q6ZWJ1 553 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 CLEC4DQ8WXI8 215 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 PRCCQ92733 491 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 ZNF341Q9BYN7 854 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 ECT2Q9H8V3 914 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 SLC5A4Q9NY91 659 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 SAMD15Q9P1V8 674 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 TRIM33Q9UPN9 1127 aa12.75□□□□□ -0.37
SEC61A1-201ENST00000243253 ACSL3O95573 720 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 CYP1A1P04798 512 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 NPR1P16066 1061 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 RRM1P23921 792 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 CRYMQ14894 314 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 SEZ6Q53EL9 994 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 ZNF276Q8N554 614 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 TMEM161BQ8NDZ6 487 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 DHX38Q92620 1227 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 THOC1Q96FV9 657 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 SNF8Q96H20 258 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 PI4K2AQ9BTU6 479 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 IGF2BP3O00425 579 aaKnown RBP eCLIP12.74□□□□□ -0.378e-7■■□□□ 14.3
SEC61A1-201ENST00000243253 SLC16A4O15374 487 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 STBD1O95210 358 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 ANP32DO95626 131 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 FGFR1P11362 822 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 PEX3P56589 373 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 KYNUQ16719 465 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 RGS9BPQ6ZS82 235 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 SYDE1Q6ZW31 735 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 MAGEB18Q96M61 343 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 ACCSQ96QU6 501 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 ADAM22Q9P0K1 906 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 ASMTLO95671 621 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 PTGER2P43116 358 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 SLC8A3P57103 927 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 DNAH12Q6ZR08 3092 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 CEP57Q86XR8 500 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 PASD1Q8IV76 773 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 TEKT3Q9BXF9 490 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 STMN4Q9H169 189 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 AVENQ9NQS1 362 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 NAALADL1Q9UQQ1 740 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 UBIAD1Q9Y5Z9 338 aa12.74□□□□□ -0.37
SEC61A1-201ENST00000243253 T-ENOLP0DO92 83 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 GNAZP19086 355 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 MXI1P50539 228 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 MON1BQ7L1V2 547 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 HAUS6Q7Z4H7 955 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 PRUNE1Q86TP1 453 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 MCOLN2Q8IZK6 566 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 TAS1R2Q8TE23 839 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 TCP11Q8WWU5 503 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 CNKSR1Q969H4 720 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 AGO4Q9HCK5 861 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 NFIBO00712 420 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 VIMP08670 466 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 SLC18A1P54219 525 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 WNT7BP56706 349 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 ENPEPQ07075 957 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 DLK2Q6UY11 383 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 SPATA21Q7Z572 469 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 MAP4K3Q8IVH8 894 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 NSMCE1Q8WV22 266 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 ZNF653Q96CK0 615 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 TMEM8AQ9HCN3 771 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 TOPORSQ9NS56 1045 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 ARL2BPQ9Y2Y0 163 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 SPOPO43791 374 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 P4HBP07237 508 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 CFHP08603 1231 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 ALDH1B1P30837 517 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 PDLIM7Q9NR12 457 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 HOMER3Q9NSC5 361 aa12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-201ENST00000243253 GM2AP17900 193 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 RDXP35241 583 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 ZNF394Q53GI3 561 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 TAS1R3Q7RTX0 852 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms