RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ABRAQ8N0Z2 381 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 ANAPC7Q9UJX3 599 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 MSCO60682 206 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 LGR5O75473 907 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 RRM1P23921 792 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 NSFP46459 744 aaKnown RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 DNAJC21Q5F1R6 531 aaKnown RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 ZBTB41Q5SVQ8 909 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 CDCA2Q69YH5 1023 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 SPOPLQ6IQ16 392 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 NCAPG2Q86XI2 1143 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 PHF13Q86YI8 300 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 BRSK2Q8IWQ3 736 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 MAIP1Q8WWC4 291 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 BBXQ8WY36 941 aaPredicted RBP17.27■□□□□ 0.36
UBE3D-201ENST00000237186 CCDC113Q9H0I3 377 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 A0A0G2JMZ2 1700 aa17.27■□□□□ 0.36
UBE3D-201ENST00000237186 IGKV6-21A0A0C4DH24 114 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 TCRBV7S2A1N4TA0A589 114 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 CLDN3O15551 220 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 FAM189A1O60320 539 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 PEX10O60683 326 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 CNMDO75829 334 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 SLC25A27O95847 323 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 MDH1P40925 334 aaKnown RBP17.27■□□□□ 0.35
UBE3D-201ENST00000237186 UBR7Q8N806 425 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 FBXO25Q8TCJ0 367 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 BCAS4Q8TDM0 211 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 CPA5Q8WXQ8 436 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 CYFIP2Q96F07 1278 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 EPB41L4BQ9H329 900 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 PABPC3Q9H361 631 aaKnown RBP17.27■□□□□ 0.35
UBE3D-201ENST00000237186 RSPH14Q9UHP6 348 aa17.27■□□□□ 0.35
UBE3D-201ENST00000237186 TOM1L1O75674 476 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 PROSCO94903 275 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 CALCAP01258 141 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 RPL21P46778 160 aaKnown RBP17.26■□□□□ 0.35
UBE3D-201ENST00000237186 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 ZNF132P52740 706 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 PLTPP55058 493 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 NOMO3P69849 1222 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 NOP14P78316 857 aaKnown RBP17.26■□□□□ 0.35
UBE3D-201ENST00000237186 PDCLQ13371 301 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 LIN9Q5TKA1 542 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 PLPPR4Q7Z2D5 763 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 WDR49Q8IV35 697 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 OR5B17Q8NGF7 314 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 MPHOSPH6Q99547 160 aaKnown RBP17.26■□□□□ 0.35
UBE3D-201ENST00000237186 MRPL4Q9BYD3 311 aaKnown RBP17.26■□□□□ 0.35
UBE3D-201ENST00000237186 AZI2Q9H6S1 392 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 ANKFY1Q9P2R3 1169 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 ATP8A1Q9Y2Q0 1164 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 RRP15Q9Y3B9 282 aaKnown RBP17.26■□□□□ 0.35
UBE3D-201ENST00000237186 NUB1Q9Y5A7 615 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 PCDHB4Q9Y5E5 795 aa17.26■□□□□ 0.35
UBE3D-201ENST00000237186 SOCS7O14512 581 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 GNA15P30679 374 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 LSP1P33241 339 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 PMS2P54278 862 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-201ENST00000237186 NCOA4Q13772 614 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 MXD4Q14582 209 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-201ENST00000237186 PLEKHA7Q6IQ23 1121 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 TMEM270Q6UE05 265 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 ERO1BQ86YB8 467 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 TCP11Q8WWU5 503 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 ART4Q93070 314 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-201ENST00000237186 MRPL47Q9HD33 250 aaKnown RBP17.25■□□□□ 0.35
UBE3D-201ENST00000237186 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBE3D-201ENST00000237186 WDR90Q96KV7 1748 aa17.25■□□□□ 0.35
UBE3D-201ENST00000237186 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 IREB2P48200 963 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 DRP2Q13474 957 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 SURF1Q15526 300 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 GADL1Q6ZQY3 521 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 SULF1Q8IWU6 871 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 CCDC105Q8IYK2 499 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 RBBP8NLQ8NC74 664 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 DDX27Q96GQ7 796 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 GPR20Q99678 358 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 ACO2Q99798 780 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 TRIM7Q9C029 511 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 EPN3Q9H201 632 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 MTRF1LQ9UGC7 380 aaKnown RBP17.24■□□□□ 0.35
UBE3D-201ENST00000237186 SLC12A6Q9UHW9 1150 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 PASKQ96RG2 1323 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 DOCK5Q9H7D0 1870 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 MAN1A1P33908 653 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 MCL1Q07820 350 aa17.24■□□□□ 0.35
UBE3D-201ENST00000237186 MAMLD1Q13495 774 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms