RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 SLC10A6Q3KNW5 377 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 TTC31Q49AM3 519 aaPredicted RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 TDRD10Q5VZ19 366 aaKnown RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 KRT39Q6A163 491 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PDXDC1Q6P996 788 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 RAD9BQ6WBX8 426 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 CACNA2D4Q7Z3S7 1137 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 ARHGEF19Q8IW93 802 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 FAM71BQ8TC56 605 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 TATDN2Q93075 761 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PI4K2AQ9BTU6 479 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 FAM107BQ9H098 131 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 AGO3Q9H9G7 860 aaKnown RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 RNF19AQ9NV58 838 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 OGDHLQ9ULD0 1010 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 COQ4Q9Y3A0 265 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 HES2Q9Y543 173 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 TET1Q8NFU7 2136 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 FANCGO15287 622 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PMM2O15305 246 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 P4HA2O15460 535 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PLEKP08567 350 aaPredicted RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 CLTAP09496 248 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 CDK7P50613 346 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 GSCP56915 257 aaPredicted RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PTPN11Q06124 597 aaPredicted RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 HSP90B2PQ58FF3 399 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 BEND6Q5SZJ8 279 aaPredicted RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 UBXN11Q5T124 520 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 ZNF618Q5T7W0 954 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 RSPH3Q86UC2 560 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 EFCAB13Q8IY85 973 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PPM1EQ8WY54 764 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 KAT5Q92993 513 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 CGRRF1Q99675 332 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 EDEM3Q9BZQ6 932 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 RNF39Q9H2S5 420 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 VIPAS39Q9H9C1 493 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 RPF1Q9H9Y2 349 aaKnown RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 UBE2TQ9NPD8 197 aaPredicted RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 SNTG2Q9NY99 539 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 DNAJC12Q9UKB3 198 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 ST3GAL5Q9UNP4 418 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 PIN4Q9Y237 131 aaKnown RBP10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 NOD1Q9Y239 953 aa10.93□□□□□ -0.66
PRAMEF4-201ENST00000235349 SCN1AP35498 2009 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 CTAGE9A4FU28 777 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 DNM1LO00429 736 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 TRIM66O15016 1216 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 N4BP1O75113 896 aaKnown RBP10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 CST3P01034 146 aaPredicted RBP10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 HLA-DRAP01903 254 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 LMAN1P49257 510 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 ENPEPQ07075 957 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 NFX1Q12986 1120 aaKnown RBP10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 MAPK8IP2Q13387 824 aaPredicted RBP10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 MEA1Q16626 185 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 ZACNQ401N2 412 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 NOTUMQ6P988 496 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 SLC27A1Q6PCB7 646 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 TOGARAM2Q6ZUX3 1019 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 FBXL13Q8NEE6 735 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 ZNF333Q96JL9 665 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 DEF6Q9H4E7 631 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 RAB20Q9NX57 234 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 APEX2Q9UBZ4 518 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 LCMT1Q9UIC8 334 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 PLAGL2Q9UPG8 496 aa10.92□□□□□ -0.66
PRAMEF4-201ENST00000235349 M0QZ92 97 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 TFRCP02786 760 aaKnown RBP10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 HSPA1AP0DMV8 641 aaKnown RBP10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 HSPA1BP0DMV9 641 aaKnown RBP10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 GHRP10912 638 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 HNRNPH3P31942 346 aaKnown RBP10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 JAM2P57087 298 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 ARID5AQ03989 594 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 BIRC3Q13489 604 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 RAPGEF1Q13905 1077 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 ARHGAP44Q17R89 818 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 FAM26DQ5JW98 314 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 FBXO47Q5MNV8 452 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 JADE1Q6IE81 842 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 SPOPLQ6IQ16 392 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 FBXO46Q6PJ61 603 aaPredicted RBP10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 IRF2BP2Q7Z5L9 587 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 CCDC91Q7Z6B0 441 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 USP37Q86T82 979 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 IQCDQ96DY2 449 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 ACAP3Q96P50 834 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 ADPGKQ9BRR6 497 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 DESI2Q9BSY9 194 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 APOL6Q9BWW8 343 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 MTMR12Q9C0I1 747 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 GPR88Q9GZN0 384 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 NXF3Q9H4D5 531 aaKnown RBP10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 ARHGAP20Q9P2F6 1191 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 L1RE1Q9UN81 338 aa10.91□□□□□ -0.66
PRAMEF4-201ENST00000235349 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms