RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 B3GAT3O94766 335 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 RHOP08100 348 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 TDGF1P13385 188 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 CEBPBP17676 345 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 SDHBP21912 280 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 FCARP24071 287 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
FRG1-201ENST00000226798 CLCNKBP51801 687 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 LMNB2Q03252 620 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 UPP1Q16831 310 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 SLC8B1Q6J4K2 584 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 TSSK4Q6SA08 328 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 ZNF852Q6ZMS4 543 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 CATSPER3Q86XQ3 398 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 C3orf58Q8NDZ4 430 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 DNASE1L2Q92874 299 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 ELSPBP1Q96BH3 223 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 CNTNAP3BQ96NU0 1288 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 ADPGKQ9BRR6 497 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 FAM126AQ9BYI3 521 aaPredicted RBP12.75□□□□□ -0.37
FRG1-201ENST00000226798 CNTNAP3Q9BZ76 1288 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 TMEM60Q9H2L4 133 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 TUFT1Q9NNX1 390 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 HEBP1Q9NRV9 189 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
FRG1-201ENST00000226798 GDAQ9Y2T3 454 aa12.75□□□□□ -0.37
FRG1-201ENST00000226798 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 NCAM2O15394 837 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 MED24O75448 989 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 NAMPTP43490 491 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 ATXN1P54253 815 aaKnown RBP12.74□□□□□ -0.37
FRG1-201ENST00000226798 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 ROR1Q01973 937 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 MTAPQ13126 283 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 GLRA4Q5JXX5 417 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 PRSS36Q5K4E3 855 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 TANGO2Q6ICL3 276 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 ANKS3Q6ZW76 656 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
FRG1-201ENST00000226798 MCRS1Q96EZ8 462 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 UROC1Q96N76 676 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
FRG1-201ENST00000226798 MRPS17Q9Y2R5 130 aaKnown RBP12.74□□□□□ -0.37
FRG1-201ENST00000226798 CNOT1A5YKK6 2376 aaKnown RBP12.74□□□□□ -0.37
FRG1-201ENST00000226798 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 BTBD18B2RXH4 712 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 I3L4J1 428 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 TBC1D4O60343 1298 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 ABLIM3O94929 683 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 CYP11B2P19099 503 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 SOX4Q06945 474 aaPredicted RBP12.73□□□□□ -0.37
FRG1-201ENST00000226798 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 NT5DC1Q5TFE4 455 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 DIS3L2Q8IYB7 885 aaKnown RBP12.73□□□□□ -0.37
FRG1-201ENST00000226798 ZNF461Q8TAF7 563 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
FRG1-201ENST00000226798 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 CHRDQ9H2X0 955 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
FRG1-201ENST00000226798 SPEGQ15772 3267 aa12.73□□□□□ -0.37
FRG1-201ENST00000226798 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
FRG1-201ENST00000226798 TRAPPC3O43617 180 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 MICAL2O94851 1124 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 LRG1P02750 347 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 PTPN2P17706 415 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 RPA1P27694 616 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 BRCC3P46736 316 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 EFNA5P52803 228 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 PPP2R5AQ15172 486 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 XKR4Q5GH76 650 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 FAM78AQ5JUQ0 283 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 ATF7IP2Q5U623 682 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 DEPTORQ8TB45 409 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 TCEAL4Q96EI5 215 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 ASB16Q96NS5 453 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 KRTAP3-3Q9BYR6 98 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 KRTAP3-2Q9BYR7 98 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 TRPV5Q9NQA5 729 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 RALGAPA1Q6GYQ0 2036 aa12.72□□□□□ -0.37
FRG1-201ENST00000226798 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 ARHGEF35A5YM69 484 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 MAN2B1O00754 1011 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 PRRG1O14668 218 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 KRT37O76014 449 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 LARGE1O95461 756 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 HOXB3P14651 431 aaPredicted RBP12.71□□□□□ -0.37
FRG1-201ENST00000226798 ATF2P15336 505 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 LIG1P18858 919 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 CCR2P41597 374 aa12.71□□□□□ -0.37
FRG1-201ENST00000226798 GRM2Q14416 872 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms