RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MCOLN2Q8IZK6 566 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 GDAP1Q8TB36 358 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 TBC1D22BQ9NU19 505 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 ANAPC5Q9UJX4 755 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 R3HDM2Q9Y2K5 976 aaKnown RBP18.41■□□□□ 0.54
USB1-201ENST00000219281 ATP9AO75110 1047 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 MYCLP12524 364 aaPredicted RBP18.4■□□□□ 0.54
USB1-201ENST00000219281 UNGP13051 313 aaPredicted RBP18.4■□□□□ 0.54
USB1-201ENST00000219281 ATF2P15336 505 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 RRM1P23921 792 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 SLC8A1P32418 973 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 PSMC5P62195 406 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 SLC39A4Q6P5W5 647 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
USB1-201ENST00000219281 TMC2Q8TDI7 906 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 MAIP1Q8WWC4 291 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 POMGNT1Q8WZA1 660 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 TBC1D31Q96DN5 1066 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 MFSD14AQ96MC6 490 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 TAAR1Q96RJ0 339 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 HEMGNQ9BXL5 484 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 KMT5AQ9NQR1 393 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 TCEAL9Q9UHQ7 104 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 GAS8O95995 478 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
USB1-201ENST00000219281 SOX10P56693 466 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 CYP24A1Q07973 514 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 DMP1Q13316 513 aaPredicted RBP18.4■□□□□ 0.54
USB1-201ENST00000219281 MPP2Q14168 576 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 SYDE1Q6ZW31 735 aaPredicted RBP18.4■□□□□ 0.54
USB1-201ENST00000219281 CYP4X1Q8N118 509 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 SLC17A8Q8NDX2 589 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 GRK7Q8WTQ7 553 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 BSNDQ8WZ55 320 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 FAM118BQ9BPY3 351 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 NINJ2Q9NZG7 142 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 TBK1Q9UHD2 729 aa18.4■□□□□ 0.54
USB1-201ENST00000219281 CCNE2O96020 404 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 GH1P01241 217 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 BRAFP15056 766 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 MAN1A1P33908 653 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 MCF2L2Q86YR7 1114 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 MICALL2Q8IY33 904 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 ATL2Q8NHH9 583 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 SYTL5Q8TDW5 730 aaPredicted RBP18.39■□□□□ 0.54
USB1-201ENST00000219281 CKAP2Q8WWK9 683 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.54
USB1-201ENST00000219281 TRAIPQ9BWF2 469 aa18.39■□□□□ 0.54
USB1-201ENST00000219281 CFAP73A6NFT4 308 aa18.39■□□□□ 0.53
USB1-201ENST00000219281 SUN1O94901 812 aa18.39■□□□□ 0.53
USB1-201ENST00000219281 CETPP11597 493 aa18.39■□□□□ 0.53
USB1-201ENST00000219281 NF2P35240 595 aa18.39■□□□□ 0.53
USB1-201ENST00000219281 GMPSP49915 693 aaPredicted RBP18.39■□□□□ 0.53
USB1-201ENST00000219281 RPAINQ86UA6 219 aa18.39■□□□□ 0.53
USB1-201ENST00000219281 ECT2Q9H8V3 914 aa18.39■□□□□ 0.53
USB1-201ENST00000219281 RAVER2Q9HCJ3 691 aaKnown RBP18.39■□□□□ 0.53
USB1-201ENST00000219281 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
USB1-201ENST00000219281 GTF2H1P32780 548 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 SLC1A1P43005 524 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 NCALDP61601 193 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 KCNJ2P63252 427 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 CAV1Q03135 178 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 ADCY1Q08828 1119 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 FBXL18Q96ME1 805 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 TACO1Q9BSH4 297 aaKnown RBP18.38■□□□□ 0.53
USB1-201ENST00000219281 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 MYPNQ86TC9 1320 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 O00370 1275 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 RALAP11233 206 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 RPS12P25398 132 aaKnown RBP18.38■□□□□ 0.53
USB1-201ENST00000219281 GCNT1Q02742 428 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 PGM5Q15124 567 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 ZKSCAN8Q15776 578 aaPredicted RBP18.38■□□□□ 0.53
USB1-201ENST00000219281 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 ANO5Q75V66 913 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 AVENQ9NQS1 362 aaPredicted RBP18.38■□□□□ 0.53
USB1-201ENST00000219281 ANKEF1Q9NU02 776 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
USB1-201ENST00000219281 WDR64B1ANS9 1081 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 WDR46O15213 610 aaKnown RBP18.37■□□□□ 0.53
USB1-201ENST00000219281 SORBS3O60504 671 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 JAK3P52333 1124 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 TNFAIP1Q13829 316 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 GALNTL6Q49A17 601 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 NBPF12Q5TAG4 269 aaPredicted RBP18.37■□□□□ 0.53
USB1-201ENST00000219281 LMBRD2Q68DH5 695 aaPredicted RBP18.37■□□□□ 0.53
USB1-201ENST00000219281 SPATA21Q7Z572 469 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 FAM213AQ9BRX8 229 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 NAALADL1Q9UQQ1 740 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 NQO1P15559 274 aaKnown RBP18.37■□□□□ 0.53
USB1-201ENST00000219281 STX2P32856 288 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 CENPCQ03188 943 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 USP37Q86T82 979 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 PRUNE1Q86TP1 453 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 GPD1LQ8N335 351 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 LPAR1Q92633 364 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 FAM81BQ96LP2 452 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 TGS1Q96RS0 853 aaKnown RBP18.37■□□□□ 0.53
USB1-201ENST00000219281 C1orf112Q9NSG2 853 aa18.37■□□□□ 0.53
USB1-201ENST00000219281 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms