RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 OLFML2BQ68BL8 750 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 C11orf63Q6NUN7 778 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 PPP1R2P3Q6NXS1 205 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 ACTRT1Q8TDG2 376 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 TRIM11Q96F44 468 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 UVRAGQ9P2Y5 699 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 GTF3C4Q9UKN8 822 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 GNEQ9Y223 722 aaKnown RBP18.65■□□□□ 0.58
VRK1-201ENST00000216639 NUB1Q9Y5A7 615 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 MTA2O94776 668 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 ERLIN2O94905 339 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 SEC31AO94979 1220 aaKnown RBP18.64■□□□□ 0.57
VRK1-201ENST00000216639 IQCF3P0C7M6 154 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 OSTNP61366 133 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 LONRF2Q1L5Z9 754 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 TMEM270Q6UE05 265 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 TRIM72Q6ZMU5 477 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 TLK2Q86UE8 772 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 ZNF653Q96CK0 615 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 EVPLQ92817 2033 aa18.64■□□□□ 0.57
VRK1-201ENST00000216639 NRCAMQ92823 1304 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 CEP104O60308 925 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 CYP1A2P05177 515 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 MARCH8Q5T0T0 291 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 C8orf74Q6P047 294 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 APBB1IPQ7Z5R6 666 aaPredicted RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 USP6NLQ92738 828 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 APBA2Q99767 749 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 SMARCAL1Q9NZC9 954 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 EHD2Q9NZN4 543 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 COG5Q9UP83 839 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 MIF4GDA9UHW6 222 aaKnown RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 PGRMC1O00264 195 aaKnown RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 ADCY6O43306 1168 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 CST3P01034 146 aaPredicted RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 ZNF865P0CJ78 1059 aaPredicted RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 MYBL1P10243 752 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 CYP2B6P20813 491 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 CPT1AP50416 773 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 MYL6P60660 151 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 YWHAEP62258 255 aaKnown RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 TNNC1P63316 161 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 CLUL1Q15846 466 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 AMHR2Q16671 573 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 CDR2LQ86X02 465 aaPredicted RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 USP38Q8NB14 1042 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 RBBP8NLQ8NC74 664 aaPredicted RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 CCDC102AQ96A19 550 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 ADPGKQ9BRR6 497 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 NIF3L1Q9GZT8 377 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 AP5M1Q9H0R1 490 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 PDZD7Q9H5P4 517 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 RBM12Q9NTZ6 932 aaKnown RBP18.63■□□□□ 0.57
VRK1-201ENST00000216639 Q9Y3F1 56 aa18.63■□□□□ 0.57
VRK1-201ENST00000216639 GPR25O00155 361 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 TNPO2O14787 897 aaKnown RBP18.62■□□□□ 0.57
VRK1-201ENST00000216639 F2P00734 622 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 STAG3L1P0CL83 205 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 CXCL8P10145 99 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 UNGP13051 313 aaPredicted RBP18.62■□□□□ 0.57
VRK1-201ENST00000216639 GNA15P30679 374 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 NSFP46459 744 aaKnown RBP18.62■□□□□ 0.57
VRK1-201ENST00000216639 PTPROQ16827 1216 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 ZNF699Q32M78 642 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 BEND6Q5SZJ8 279 aaPredicted RBP18.62■□□□□ 0.57
VRK1-201ENST00000216639 KRT222Q8N1A0 295 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 UBL4BQ8N7F7 174 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 RPS6KC1Q96S38 1066 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.62■□□□□ 0.57
VRK1-201ENST00000216639 LRRC1Q9BTT6 524 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 NUP85Q9BW27 656 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 ASB7Q9H672 318 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 SETD4Q9NVD3 440 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 FLRT1Q9NZU1 646 aa18.62■□□□□ 0.57
VRK1-201ENST00000216639 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
VRK1-201ENST00000216639 SMIM10L2AP0DMW4 78 aa18.61■□□□□ 0.57
VRK1-201ENST00000216639 SMIM10L2BP0DMW5 78 aa18.61■□□□□ 0.57
VRK1-201ENST00000216639 ARF4P18085 180 aaPredicted RBP18.61■□□□□ 0.57
VRK1-201ENST00000216639 HDXQ7Z353 690 aa18.61■□□□□ 0.57
VRK1-201ENST00000216639 CEP120Q8N960 986 aa18.61■□□□□ 0.57
VRK1-201ENST00000216639 ZNF564Q8TBZ8 553 aaPredicted RBP18.61■□□□□ 0.57
VRK1-201ENST00000216639 GCOM2Q9BZD3 368 aaPredicted RBP18.61■□□□□ 0.57
VRK1-201ENST00000216639 CNOT8Q9UFF9 292 aaKnown RBP18.61■□□□□ 0.57
VRK1-201ENST00000216639 ALG6Q9Y672 507 aa18.61■□□□□ 0.57
VRK1-201ENST00000216639 FAM170AA1A519 330 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 TSPAN1O60635 241 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 CSDE1O75534 798 aaKnown RBP18.6■□□□□ 0.57
VRK1-201ENST00000216639 TBC1D8O95759 1140 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 CYP1A1P04798 512 aaPredicted RBP18.6■□□□□ 0.57
VRK1-201ENST00000216639 CYP2C19P33261 490 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 EFCAB13Q8IY85 973 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 RASGEF1CQ8N431 466 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 FAXDC2Q96IV6 333 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 CPB2Q96IY4 423 aa18.6■□□□□ 0.57
VRK1-201ENST00000216639 NAP1L3Q99457 506 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms