RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 FSCN1Q16658 493 aaKnown RBP3.84□□□□□ -1.79
CDKN3-201ENST00000216414 KIAA1614Q5VZ46 1190 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 KAZNQ674X7 775 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 ZNF425Q6IV72 752 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.84□□□□□ -1.79
CDKN3-201ENST00000216414 PEG10Q86TG7 708 aaKnown RBP3.84□□□□□ -1.79
CDKN3-201ENST00000216414 PDPRQ8NCN5 879 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 HASPINQ8TF76 798 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 SARAFQ96BY9 339 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 PNKPQ96T60 521 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 TIMP4Q99727 224 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 MYOCQ99972 504 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 HSFX1Q9UBD0 423 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 AJAP1Q9UKB5 411 aaPredicted RBP3.84□□□□□ -1.79
CDKN3-201ENST00000216414 ENTPD2Q9Y5L3 495 aa3.84□□□□□ -1.79
CDKN3-201ENST00000216414 GSG1L2A8MUP6 293 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 CELA2AP08217 269 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 POU3F3P20264 500 aaPredicted RBP3.83□□□□□ -1.8
CDKN3-201ENST00000216414 FPR1P21462 350 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 ENPP1P22413 925 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 NOMO3P69849 1222 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 NOMO1Q15155 1222 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 NOMO2Q5JPE7 1267 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 GJC2Q5T442 439 aaPredicted RBP3.83□□□□□ -1.8
CDKN3-201ENST00000216414 OTUD7BQ6GQQ9 843 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 C16orf86Q6ZW13 317 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 AMIGO2Q86SJ2 522 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 FITM2Q8N6M3 262 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 LEO1Q8WVC0 666 aaPredicted RBP3.83□□□□□ -1.8
CDKN3-201ENST00000216414 AUTS2Q8WXX7 1259 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 TFAP2BQ92481 460 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 DPF1Q92782 380 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 FBXL20Q96IG2 436 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 ACAP3Q96P50 834 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 QRSL1Q9H0R6 528 aaKnown RBP3.83□□□□□ -1.8
CDKN3-201ENST00000216414 TOPORSQ9NS56 1045 aaPredicted RBP3.83□□□□□ -1.8
CDKN3-201ENST00000216414 TMEM140Q9NV12 185 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 SLC23A1Q9UHI7 598 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 RUVBL1Q9Y265 456 aaKnown RBP3.83□□□□□ -1.8
CDKN3-201ENST00000216414 ACTL7AQ9Y615 435 aa3.83□□□□□ -1.8
CDKN3-201ENST00000216414 CCDC151A5D8V7 595 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 TEX33O43247 280 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 PRKCGP05129 697 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 ALAS1P13196 640 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 GUCY1A2P33402 732 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 ADRM1Q16186 407 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 MUM1L1Q5H9M0 696 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 SEM1Q6ZVN7 128 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 TBC1D15Q8TC07 691 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 TSPEARQ8WU66 669 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 NUP133Q8WUM0 1156 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 APPBP2Q92624 585 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 FATE1Q969F0 183 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 TMEM125Q96AQ2 219 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 MED15Q96RN5 788 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 ACE2Q9BYF1 805 aaPredicted RBP3.82□□□□□ -1.8
CDKN3-201ENST00000216414 GSTO2Q9H4Y5 243 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 DMRT3Q9NQL9 472 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 RBM12Q9NTZ6 932 aaKnown RBP3.82□□□□□ -1.8
CDKN3-201ENST00000216414 FANCLQ9NW38 375 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 FAM30AQ9NZY2 134 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 ZBTB21Q9ULJ3 1066 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 WNT6Q9Y6F9 365 aa3.82□□□□□ -1.8
CDKN3-201ENST00000216414 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.81□□□□□ -1.8
CDKN3-201ENST00000216414 CDHR4A6H8M9 788 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 MPPED1O15442 326 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 WT1P19544 449 aaPredicted RBP3.81□□□□□ -1.8
CDKN3-201ENST00000216414 ITPKBP27987 946 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 GRIA3P42263 894 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 MRPS9P82933 396 aaKnown RBP3.81□□□□□ -1.8
CDKN3-201ENST00000216414 KIAA0895LQ68EN5 471 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 FCRLBQ6BAA4 426 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 VWA1Q6PCB0 445 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 CLRN3Q8NCR9 226 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 TOR1AIP2Q8NFQ8 470 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 TGFBRAP1Q8WUH2 860 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 USP7Q93009 1102 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 MFSD3Q96ES6 412 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 RNPC3Q96LT9 517 aaKnown RBP3.81□□□□□ -1.8
CDKN3-201ENST00000216414 ADI1Q9BV57 179 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 GREM2Q9H772 168 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 IFT122Q9HBG6 1241 aa3.81□□□□□ -1.8
CDKN3-201ENST00000216414 TCRBV7S2A1N4TA0A589 114 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 KIAA0391O15091 583 aaKnown RBP3.8□□□□□ -1.8
CDKN3-201ENST00000216414 GPR32O75388 356 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 ENDOD1O94919 500 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 PCSK1P29120 753 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 SESN3P58005 492 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 MUM1Q2TAK8 710 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 CCDC144BQ3MJ40 725 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 TSHZ1Q6ZSZ6 1077 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 VGLL2Q8N8G2 317 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 CCHCR1Q8TD31 782 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 CASKIN2Q8WXE0 1202 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 ZBTB9Q96C00 473 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 SCOCQ9UIL1 159 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 ST3GAL5Q9UNP4 418 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 CACNA1IQ9P0X4 2223 aa3.8□□□□□ -1.8
CDKN3-201ENST00000216414 ULK1O75385 1050 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms