RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 FTHL17Q9BXU8 183 aa10.75□□□□□ -0.69
RTCB-201ENST00000216038 TMEM117Q9H0C3 514 aa10.75□□□□□ -0.69
RTCB-201ENST00000216038 TSPYL2Q9H2G4 693 aaPredicted RBP10.75□□□□□ -0.69
RTCB-201ENST00000216038 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
RTCB-201ENST00000216038 ZNF446Q9NWS9 450 aa10.75□□□□□ -0.69
RTCB-201ENST00000216038 PLAGL2Q9UPG8 496 aa10.75□□□□□ -0.69
RTCB-201ENST00000216038 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
RTCB-201ENST00000216038 PDCD11Q14690 1871 aaKnown RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 CHD9Q3L8U1 2897 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 FGFR1P11362 822 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 ACTN1P12814 892 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 MXI1P50539 228 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 MYL7Q01449 175 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 ELF2Q15723 593 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 FKBP15Q5T1M5 1219 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.74□□□□□ -0.698e-14■■■■□ 23.5
RTCB-201ENST00000216038 OTOP2Q7RTS6 562 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 TMCO2Q7Z6W1 182 aaPredicted RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 USP37Q86T82 979 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 C18orf25Q96B23 403 aaPredicted RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 CGRRF1Q99675 332 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 HTATIP2Q9BUP3 242 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 FAM207AQ9NSI2 230 aaPredicted RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 BCCIPQ9P287 314 aaKnown RBP eCLIP10.74□□□□□ -0.69
RTCB-201ENST00000216038 CACNG4Q9UBN1 327 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 INPP5FQ9Y2H2 1132 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 TDRD15B5MCY1 1934 aaKnown RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 RALGAPA2Q2PPJ7 1873 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 SCN1AP35498 2009 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 ARL5CA6NH57 179 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 CLSTN1O94985 981 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 UPP2O95045 317 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 IL18RAPO95256 599 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 PARNO95453 639 aaKnown RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 TMEM191BP0C7N4 346 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 PNMA6AP0CW24 399 aaPredicted RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 SLC9A1P19634 815 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 RAB27AP51159 221 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 CLDN10P78369 228 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 KCNMA1Q12791 1236 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 LRMPQ12912 555 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 MAPK8IP2Q13387 824 aaPredicted RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 TMEM132DQ14C87 1099 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 KYAT1Q16773 422 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 TDRD10Q5VZ19 366 aaKnown RBP10.74□□□□□ -0.69
RTCB-201ENST00000216038 ALKAL1Q6UXT8 129 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 TMC6Q7Z403 805 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 TAS1R2Q8TE23 839 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 CPLX3Q8WVH0 158 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 SEMA4DQ92854 862 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 APBB2Q92870 758 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 MRFAP1L1Q96HT8 127 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 PI4K2AQ9BTU6 479 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 TRAIPQ9BWF2 469 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 GOLGA2P5Q9HBQ8 144 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 GCNT4Q9P109 453 aa10.74□□□□□ -0.69
RTCB-201ENST00000216038 PTGESO14684 152 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 ZNF623O75123 536 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 PHACTR2O75167 634 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 ZRANB2O95218 330 aaKnown RBP eCLIP10.73□□□□□ -0.69
RTCB-201ENST00000216038 CST3P01034 146 aaPredicted RBP10.73□□□□□ -0.69
RTCB-201ENST00000216038 POMCP01189 267 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 KRT19P08727 400 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 GATMP50440 423 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 SCNN1GP51170 649 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 IKBKEQ14164 716 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 EXOC3L4Q17RC7 722 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 DUOXA2Q1HG44 320 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 KRT39Q6A163 491 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 CNKSR3Q6P9H4 555 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 C16orf59Q7L2K0 433 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 MRPL10Q7Z7H8 261 aaKnown RBP10.73□□□□□ -0.69
RTCB-201ENST00000216038 ZNF598Q86UK7 904 aaKnown RBP10.73□□□□□ -0.69
RTCB-201ENST00000216038 WDR49Q8IV35 697 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 LRRC8AQ8IWT6 810 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 GSTCDQ8NEC7 633 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 HELQQ8TDG4 1101 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 RABGGTAQ92696 567 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 UBXN6Q9BZV1 441 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 ASB7Q9H672 318 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 RSAD1Q9HA92 442 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 TMEM8AQ9HCN3 771 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 MIOSQ9NXC5 875 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 TUBGCP4Q9UGJ1 667 aa10.73□□□□□ -0.69
RTCB-201ENST00000216038 LTBP2Q14767 1821 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 EPHB6O15197 1021 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 VNN1O95497 513 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 C4BPAP04003 597 aaKnown RBP10.72□□□□□ -0.69
RTCB-201ENST00000216038 PON1P27169 355 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 RFC2P35250 354 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 PBX1P40424 430 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 EPHB4P54760 987 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SOX4Q06945 474 aaPredicted RBP10.72□□□□□ -0.69
RTCB-201ENST00000216038 GOLGA8FQ08AF8 430 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 GOLGA8DPQ0D2H9 430 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ZSCAN26Q16670 478 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ZACNQ401N2 412 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 FAM117BQ6P1L5 589 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms