RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 NFKBIBQ15653 356 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 EDRF1Q3B7T1 1238 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 TTI2Q6NXR4 508 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 CD302Q8IX05 232 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 MED15Q96RN5 788 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
SYPL1-201ENST00000011473 TSG101Q99816 390 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
SYPL1-201ENST00000011473 ADAM28Q9UKQ2 775 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 FRMD4BQ9Y2L6 1034 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 C2CD2Q9Y426 696 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 COL4A4P53420 1690 aaPredicted RBP13.04□□□□□ -0.32
SYPL1-201ENST00000011473 C2CD2LO14523 706 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 FOSL2P15408 326 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 TNNI1P19237 187 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 BRCC3P46736 316 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 CD300LGQ6UXG3 332 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 MFSD14AQ96MC6 490 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 FNBP1Q96RU3 617 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 TCF25Q9BQ70 676 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 COLEC11Q9BWP8 271 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
SYPL1-201ENST00000011473 MTCH2Q9Y6C9 303 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
SYPL1-201ENST00000011473 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 NLRP12P59046 1061 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 FKBP3Q00688 224 aaKnown RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 PSMD6Q15008 389 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 CCDC85BQ15834 202 aaPredicted RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 PLPP4Q5VZY2 271 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TMC7Q7Z402 723 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 FAM186BQ8IYM0 893 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TMEM174Q8WUU8 243 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 ENTPD7Q9NQZ7 604 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 DPP3Q9NY33 737 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TDRD15B5MCY1 1934 aaKnown RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 LRRIQ3A6PVS8 624 aaPredicted RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 ITGB3P05106 788 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 KRT19P08727 400 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TRIM49P0CI25 452 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 TRIM49CP0CI26 452 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 POU5F1Q01860 360 aaKnown RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 NFIL3Q16649 462 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 MLKLQ8NB16 471 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 PARD3BQ8TEW8 1205 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 MMRN2Q9H8L6 949 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 INTS13Q9NVM9 706 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 PUF60Q9UHX1 559 aaKnown RBP13.03□□□□□ -0.32
SYPL1-201ENST00000011473 DERAQ9Y315 318 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
SYPL1-201ENST00000011473 CETN3O15182 167 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 POLR2BP30876 1174 aaKnown RBP13.02□□□□□ -0.33
SYPL1-201ENST00000011473 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 C9orf57Q5W0N0 161 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 DCLRE1AQ6PJP8 1040 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 SASS6Q6UVJ0 657 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 ADGRD2Q7Z7M1 963 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
SYPL1-201ENST00000011473 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.33
SYPL1-201ENST00000011473 CEP57Q86XR8 500 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 CSGALNACT2Q8N6G5 542 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 ELMO3Q96BJ8 720 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 MRPL38Q96DV4 380 aaKnown RBP13.02□□□□□ -0.33
SYPL1-201ENST00000011473 UROC1Q96N76 676 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.33
SYPL1-201ENST00000011473 TRIP11Q15643 1979 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 CITO14578 2027 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 PER2O15055 1255 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 SPTLC1O15269 473 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 XPOTO43592 962 aaKnown RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 CYP3A5P20815 502 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 LRPAP1P30533 357 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 RPL9P32969 192 aaKnown RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 PPP1R2P41236 205 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 TIGD5Q53EQ6 642 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 HSP90AA4PQ58FG1 418 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 C1orf220Q5T0J3 134 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 WDR49Q8IV35 697 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 ZBP1Q9H171 429 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms