RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 KRT38O76015 456 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 HMBSP08397 361 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 WEE2P0C1S8 567 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 HARS2P49590 506 aaKnown RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 DEUP1Q05D60 604 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 SF3A3Q12874 501 aaKnown RBP eCLIP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 ELAVL2Q12926 359 aaKnown RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 FSCN1Q16658 493 aaKnown RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 ANO4Q32M45 955 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 CERS5Q8N5B7 392 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 ASAP3Q8TDY4 903 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 MKL1Q969V6 931 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 CAPS2Q9BXY5 557 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 RANBP17Q9H2T7 1088 aaKnown RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 GPRC5CQ9NQ84 441 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 GRID2IPA4D2P6 1211 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC15A5A6NIM6 579 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 EGFRP00533 1210 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 THP07101 528 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 MX2P20592 715 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 RMDN1Q96DB5 314 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 WDR18Q9BV38 432 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 NUF2Q9BZD4 464 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 SSU72P8A0A1W2PR75 194 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 CCDC160A6NGH7 325 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 MMS22LQ6ZRQ5 1243 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 RCOR2Q8IZ40 523 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 REPS2Q8NFH8 660 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 TRPM4Q8TD43 1214 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 VCX3BQ9H321 246 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 NAGPAQ9UK23 515 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 PCDHB12Q9Y5F1 795 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 SALL3Q9BXA9 1300 aa10.94□□□□□ -0.66
NIPAL3-201ENST00000003912 AP3B1O00203 1094 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 FKTNO75072 461 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 PRAMEP78395 509 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC18A3Q16572 532 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 PAN2Q504Q3 1202 aaKnown RBP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 CYP4A22Q5TCH4 519 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 SDE2Q6IQ49 451 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 PID1Q7Z2X4 250 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ITIH6Q6UXX5 1313 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ARHGAP42A6NI28 874 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 EVI5O60447 810 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 FMR1Q06787 632 aaKnown RBP eCLIP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 GLRA4Q5JXX5 417 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ALKBH8Q96BT7 664 aaKnown RBP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■■■■■ 27.7
NIPAL3-201ENST00000003912 TBK1Q9UHD2 729 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 FZD1Q9UP38 647 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 A0A087WZ62 844 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ADCY3O60266 1144 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 GUCY2CP25092 1073 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 GTF2H1P32780 548 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ZNF211Q13398 564 aaPredicted RBP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 DEFB128Q7Z7B8 93 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 FDXACB1Q9BRP7 624 aaPredicted RBP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 SNX24Q9Y343 169 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ATP8B1O43520 1251 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ZC3H11AO75152 810 aaKnown RBP eCLIP10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 PSEN2P49810 448 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ADCY2Q08462 1091 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 TMEM132BQ14DG7 1078 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 OSMRQ99650 979 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 CATSPERBQ9H7T0 1116 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 KIAA1257Q9ULG3 409 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
NIPAL3-201ENST00000003912 E5RI56 91 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 PSMD3O43242 534 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 SNX2O60749 519 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 IRF1P10914 325 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 C10orf120Q5SQS8 335 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 C6orf118Q5T5N4 469 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 GPAT2Q6NUI2 795 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 REM2Q8IYK8 340 aaPredicted RBP10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC30A5Q8TAD4 765 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 MUC3BQ9H195 1237 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 RPL10AP62906 217 aaKnown RBP10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 ARID5BQ14865 1188 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 KCTD16Q68DU8 428 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 EMBQ6PCB8 327 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 PGBD3Q8N328 593 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 ATPAF2Q8N5M1 289 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 TINF2Q9BSI4 451 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 NR2E3Q9Y5X4 410 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 FHOD1Q9Y613 1164 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 SLIT3O75094 1523 aa10.92□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC2A3P11169 496 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms