RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Nme5Q99MH5 211 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tktl2Q9D4D4 627 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Sgf29Q9DA08 293 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Fads3Q9JJE7 449 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Acot3Q9QYR7 432 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Trim15G3UY57 292 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm3383J3QQ59 259 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm3164L7N2B9 238 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm3239L7N2D9 227 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Jdp2P97875 163 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Agap2Q3UHD9 1186 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pdap1Q3UHX2 181 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rbm15bQ6PHZ5 887 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ip6k2Q80V72 448 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Clic5Q8BXK9 251 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Coa7Q921H9 231 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 NkapQ9D0F4 415 aaKnown RBP10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Chit1Q9D7Q1 464 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Borcs5Q9D920 195 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tmem47Q9JJG6 181 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 CtsfQ9R013 462 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Deaf1Q9Z1T5 566 aa10.76□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ankfn1A0A140LIW7 1083 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Arid5aQ3U108 590 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Phactr4Q501J7 694 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 E2f8Q58FA4 860 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 A430089I19RikQ8C9W1 407 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Dnm1lQ8K1M6 742 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Fam162aQ9D6U8 155 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 PdgfraP26618 1089 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Cab39Q06138 341 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Grid1Q61627 1009 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Sema4bQ62179 823 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Atg9aQ68FE2 551 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Zfp263Q8CF60 680 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 BicralQ8CHH5 1074 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Mrpl47Q8K2Y7 252 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tm9sf1Q9DBU0 606 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Xpo7Q9EPK7 1087 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Capn15Q9JLG8 1095 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 F830016B08RikG3UWE2 416 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Alppl2P24823 529 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Hmgb2P30681 210 aaKnown RBP10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Fam83bQ0VBM2 1012 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Slc24a2Q14BI1 711 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Glra4Q61603 456 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pcdhb7Q8CDY9 829 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rnf8Q8VC56 488 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Git2Q9JLQ2 708 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm3402K7N5P2 326 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Akr1b1P45376 316 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Eif3eP60229 445 aaKnown RBP10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Cdk16Q04735 496 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Nsun7Q14AW5 724 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Creb3Q61817 404 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 WaplQ65Z40 1200 aaKnown RBP10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Antxr2Q6DFX2 487 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Krt40Q6IFX3 439 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Snx19Q6P4T1 997 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Senp6Q6P7W0 1132 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 PigsQ6PD26 555 aaKnown RBP10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Txndc5Q91W90 417 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pdxdc1Q99K01 787 aaKnown RBP10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ndc80Q9D0F1 642 aaKnown RBP10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Hormad1Q9D5T7 392 aa10.75□□□□□ -0.69
Lig4-201ENSMUST00000095476 Arhgef10lA2AWP8 1280 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm3460E9QAI8 215 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Oprl1P35377 367 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rps6P62754 249 aaKnown RBP10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 EgfrQ01279 1210 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Fam107aQ78TU8 144 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Iars2Q8BIJ6 1012 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Tubgcp5Q8BKN5 1024 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Trim14Q8BVW3 440 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Ssh3Q8K330 649 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Kcnq3Q8K3F6 873 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Guca1bQ8VBV8 201 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Rpa3Q9CQ71 121 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Lrrc17Q9CXD9 443 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gsdmdc1Q9D8T2 487 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 CrotQ9DC50 612 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 PtprmP28828 1452 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 4930469K13RikA0A286YDB2 92 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pabpc1lA2A5N3 607 aaKnown RBP10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm4307E9PZY4 289 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Gm4312K9J7E2 289 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Cyp2d11P24457 504 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 PctpP53808 214 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pstpip1P97814 415 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Fam20cQ5MJS3 579 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 FancbQ5XJY6 703 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Mst1rQ62190 1378 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Usp50Q6P8X6 390 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Dna2Q6ZQJ5 1062 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Unc45bQ8CGY6 931 aaKnown RBP10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Pagr1aQ99L02 253 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Mcrs1Q99L90 462 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 Lyrm1Q9CQB7 122 aa10.74□□□□□ -0.69
Lig4-201ENSMUST00000095476 4921524L21RikQ9D5T2 438 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms