RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Actr2P61161 394 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 WlsQ6DID7 541 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 B3galnt2Q8BG28 504 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rbmx2Q8R0F5 326 aaKnown RBP14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Fthl17aQ9DAX0 182 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Aff4Q9ESC8 1160 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Scgb2b11A0A087WR49 112 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 CrnnD3YUU6 520 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm3371F7CQW8 167 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm3182K7N6T8 263 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Snap23O09044 210 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 NyxP83503 476 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rrp36Q3UFY0 244 aaKnown RBP14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Twf1Q91YR1 350 aaKnown RBP14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ugp2Q91ZJ5 508 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tmem206Q9D771 350 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tmem245B1AZA5 876 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 2210016F16RikG3X8U3 338 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trim52Q8CDV4 233 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Q9CQF4 240 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Fem1bQ9Z2G0 627 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Krt16Q9Z2K1 469 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Carmil3Q3UFQ8 1375 aa14.6□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rfx8D3YU81 596 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm6408J3QNG1 320 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Acap3Q6NXL5 833 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slc7a14Q8BXR1 771 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 DpydQ8CHR6 1025 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 MlphQ91V27 590 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ttc30a2A2AKQ8 664 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rsrc2A2RTL5 376 aaKnown RBP14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rab17P35292 214 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Kcnn2P58390 839 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Usp39Q3TIX9 564 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Calhm6Q8C9E8 313 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Pus7lQ8CE46 702 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Sesn3Q9CYP7 492 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 AlkP97793 1621 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Olfr292F8VQ84 308 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Suz12Q80U70 741 aaKnown RBP14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ttc7aQ8BGB2 858 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PodxlQ9R0M4 503 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 1700016G14RikA0A286YCZ6 238 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Psmd7P26516 321 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 InaP46660 501 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Eif3eP60229 445 aaKnown RBP14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tex13c3Q810P0 219 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cep170Q6A065 1588 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm5689F6Y2A6 97 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 PorP37040 678 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cct8P42932 548 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 SpoplQ2M2N2 392 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gm5592Q3V0A6 857 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ksr1Q61097 873 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Arhgap25Q8BYW1 648 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slc27a6E9Q9W4 619 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Hnrnph1O35737 449 aaKnown RBP14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Adcy1O88444 1118 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slc2a4P14142 509 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Sec31aQ3UPL0 1230 aaKnown RBP14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Fam8a1Q3URQ4 399 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Ces5aQ6AW46 575 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 FdpsQ920E5 353 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Eif2b2Q99LD9 351 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Lpin2Q99PI5 893 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Lrrc17Q9CXD9 443 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 CatspereP0DP43 985 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Usp13Q5BKP2 858 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Arhgap15Q811M1 481 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mccc1Q99MR8 717 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Chchd3Q9CRB9 227 aaKnown RBP14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Rcan1Q9JHG6 198 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Mtmr2Q9Z2D1 643 aa14.59□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Cdh19E9Q3A7 770 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Trappc3O55013 180 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Thap2Q9D305 217 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Xpo7Q9EPK7 1087 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slfn2Q9Z0I6 378 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Gnrh1P13562 90 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Samhd1Q60710 627 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Pwp2Q8BU03 919 aaKnown RBP14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Armcx6Q8K3A6 301 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Znrd1-asQ8R0E5 213 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Tbc1d22aQ8R5A6 516 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Depdc7Q91WS7 511 aa14.58□□□□□ -0.07
Col5a1-201ENSMUST00000028280 Slc35g2D3YVE8 412 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 LtkP08923 888 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cdo1P60334 200 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ttf2Q5NC05 1138 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Atp11bQ6DFW5 1175 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dhx40Q6PE54 779 aaKnown RBP14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Psmd5Q8BJY1 504 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmem63cQ8CBX0 802 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmem132cQ8CEF9 1099 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ascc2Q91WR3 749 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sike1Q9CPR7 207 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PpidQ9CR16 370 aaKnown RBP14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ddx39bQ9Z1N5 428 aaKnown RBP14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm45261A0A1B0GSP6 197 aa14.58□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fam102aQ78T81 392 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms