RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FAM189BP81408 668 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 UBXN1Q04323 297 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 MYO1EQ12965 1108 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 BTG3Q14201 252 aaPredicted RBP14□□□□□ -0.17
PHGDH-220ENST00000641570 KRT31Q15323 416 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 VWA3BQ502W6 1294 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 PAN2Q504Q3 1202 aaKnown RBP14□□□□□ -0.17
PHGDH-220ENST00000641570 TMEM240Q5SV17 173 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 CDKAL1Q5VV42 579 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14□□□□□ -0.17
PHGDH-220ENST00000641570 TMEM192Q8IY95 271 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 PHOSPHO2Q8TCD6 241 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 LINC01599Q8WXQ3 324 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 UROC1Q96N76 676 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 DNAI2Q9GZS0 605 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 RBSNQ9H1K0 784 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 VPS16Q9H269 839 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 TMEM8AQ9HCN3 771 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 AAASQ9NRG9 546 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 ITGA11Q9UKX5 1188 aa14□□□□□ -0.17
PHGDH-220ENST00000641570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-220ENST00000641570 TTC26A0AVF1 554 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 ARHGEF37A1IGU5 675 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 TLL1O43897 1013 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 NFICP08651 508 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 GCLMP48507 274 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 COPB1P53618 953 aaKnown RBP13.99□□□□□ -0.17
PHGDH-220ENST00000641570 FANCCQ00597 558 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 GPNMBQ14956 572 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 NCAPHQ15003 741 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 SLC10A6Q3KNW5 377 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 LMBRD2Q68DH5 695 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-220ENST00000641570 CRELD2Q6UXH1 353 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-220ENST00000641570 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 AGMOQ6ZNB7 445 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 TRIM59Q8IWR1 403 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 PARD3BQ8TEW8 1205 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 TOP1MTQ969P6 601 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 ZFP42Q96MM3 310 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 MTMR12Q9C0I1 747 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 NDST4Q9H3R1 872 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
PHGDH-220ENST00000641570 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
PHGDH-220ENST00000641570 SMIM28A0A1B0GU29 152 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 H0YGN5 161 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 P4HA2O15460 535 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 FAM189A1O60320 539 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 ZC3H11AO75152 810 aaKnown RBP eCLIP13.98□□□□□ -0.17
PHGDH-220ENST00000641570 KCNE1P15382 129 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 CYP3A5P20815 502 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 PNPLA4P41247 253 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 DEFB103AP81534 67 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 RBP5P82980 135 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 GSE1Q14687 1217 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
PHGDH-220ENST00000641570 RTN4RL1Q86UN2 441 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-220ENST00000641570 ZSWIM2Q8NEG5 633 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 DDX27Q96GQ7 796 aaKnown RBP13.98□□□□□ -0.17
PHGDH-220ENST00000641570 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 DPP3Q9NY33 737 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 INSL6Q9Y581 213 aa13.98□□□□□ -0.17
PHGDH-220ENST00000641570 LGALS16A8MUM7 142 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 OFD1O75665 1012 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 ATP1A3P13637 1013 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 ZNF18P17022 549 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 OR1G1P47890 313 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 FMO5P49326 533 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
PHGDH-220ENST00000641570 MRE11P49959 708 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 TNNC1P63316 161 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 TUSC3Q13454 348 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 CMTR2Q8IYT2 770 aaKnown RBP13.97□□□□□ -0.17
PHGDH-220ENST00000641570 FIBCD1Q8N539 461 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 SLC35C1Q96A29 364 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
PHGDH-220ENST00000641570 IFNKQ9P0W0 207 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 MSRAQ9UJ68 235 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 RWDD3Q9Y3V2 267 aa13.97□□□□□ -0.17
PHGDH-220ENST00000641570 CASTOR2A6NHX0 329 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 PODXLO00592 558 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 TRAPPC3O43617 180 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 GJB5O95377 273 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 ITGB3P05106 788 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 LAG3P18627 525 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 POLR2BP30876 1174 aaKnown RBP13.96□□□□□ -0.17
PHGDH-220ENST00000641570 RPL9P32969 192 aaKnown RBP13.96□□□□□ -0.17
PHGDH-220ENST00000641570 DLG4P78352 724 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 NCOA4Q13772 614 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 SV2CQ496J9 727 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 CLLU1OSQ5K130 101 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
PHGDH-220ENST00000641570 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms