RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CDT1Q9H211 546 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 RPF1Q9H9Y2 349 aaKnown RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ARFGAP3Q9NP61 516 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 C1orf112Q9NSG2 853 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 RAB20Q9NX57 234 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 AIPL1Q9NZN9 384 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 FBXL5Q9UKA1 691 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 TNFSF13BQ9Y275 285 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 DAAM1Q9Y4D1 1078 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 BZW2Q9Y6E2 419 aaKnown RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 V9GYY5 206 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CNTNAP2Q9UHC6 1331 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 SSU72P8A0A1W2PR75 194 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 MBLAC1A4D2B0 266 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 F8VZ95 297 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 M0QZ92 97 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 PMM2O15305 246 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 TSPAN1O60635 241 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 HLA-DRAP01903 254 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 TNNC2P02585 160 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 IQCF3P0C7M6 154 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 MCF2P10911 925 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 PRLRP16471 622 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 ARF4P18085 180 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 MFAP3P55082 362 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 WNT7BP56706 349 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 TFAMQ00059 246 aaKnown RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 HIC1Q14526 733 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 ZNF569Q5MCW4 686 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 CCDC122Q5T0U0 273 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 HGSNATQ68CP4 663 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 WDR93Q6P2C0 686 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 TRAPPC11Q7Z392 1133 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 ZNF572Q7Z3I7 529 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 FMNL3Q8IVF7 1028 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 SLC35F6Q8N357 371 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 ELMO3Q96BJ8 720 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 PI4K2AQ9BTU6 479 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 IFIH1Q9BYX4 1025 aaKnown RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 PDZD7Q9H5P4 517 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 LUC7LQ9NQ29 371 aaKnown RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 SEPT11Q9NVA2 429 aaKnown RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 CPSF3Q9UKF6 684 aaKnown RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 GUCA1BQ9UMX6 200 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 TFR2Q9UP52 801 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 REXO2Q9Y3B8 237 aaKnown RBP9.54□□□□□ -0.88
PHGDH-219ENST00000641513 PCDHA13Q9Y5I0 950 aa9.54□□□□□ -0.88
PHGDH-219ENST00000641513 TDRD15B5MCY1 1934 aaKnown RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CTAGE15A4D2H0 777 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 ABLIM1O14639 778 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 MAP2K7O14733 419 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 EVI5O60447 810 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 GPR32O75388 356 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 IL18RAPO95256 599 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 NPTXRO95502 500 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 GNRH1P01148 92 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 C4BPAP04003 597 aaKnown RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 INHAP05111 366 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 ASGR1P07306 291 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TMEM191BP0C7N4 346 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CTAGE8P0CG41 777 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 STAG3L1P0CL83 205 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CXCL8P10145 99 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 KRT5P13647 590 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TNFAIP3P21580 790 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 PROZP22891 400 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 ANXA13P27216 316 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 VAV2P52735 878 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 AP3M2P53677 418 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 KIF5AQ12840 1032 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TRPC3Q13507 836 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TERF2Q15554 542 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 KCNA10Q16322 511 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 AMHR2Q16671 573 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 ZACNQ401N2 412 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TEX35Q5T0J7 233 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TDRD10Q5VZ19 366 aaKnown RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 IRF2BP2Q7Z5L9 587 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 RSPH3Q86UC2 560 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CTAGE6Q86UF2 777 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 WDR49Q8IV35 697 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CTAGE4Q8IX94 777 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CEP120Q8N960 986 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 PCSK9Q8NBP7 692 aaKnown RBP9.53□□□□□ -0.88
PHGDH-219ENST00000641513 OR5B17Q8NGF7 314 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 TATDN2Q93075 761 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 ANKRD36BP1Q96IX9 119 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 IMPG2Q9BZV3 1241 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 ADAMTS10Q9H324 1103 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 CDHR5Q9HBB8 845 aa9.53□□□□□ -0.88
PHGDH-219ENST00000641513 PTPRHQ9HD43 1115 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms