RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FBXO38Q6PIJ6 1188 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 ZNF410Q86VK4 478 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 CREG2Q8IUH2 290 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 TPCN2Q8NHX9 752 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 DHX38Q92620 1227 aaKnown RBP18.58■□□□□ 0.56
PHGDH-208ENST00000641023 ELMO3Q96BJ8 720 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 PPP1R16BQ96T49 567 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 CDT1Q9H211 546 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 SETD4Q9NVD3 440 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 TAS2R14Q9NYV8 317 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 Q9Y3F1 56 aa18.58■□□□□ 0.56
PHGDH-208ENST00000641023 NCK2O43639 380 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 RTN2O75298 545 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 FTLP02792 175 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-208ENST00000641023 H2AFXP16104 143 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-208ENST00000641023 CUL2Q13617 745 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 CCDC181Q5TID7 509 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 TAF3Q5VWG9 929 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 EEF1DP3Q658K8 133 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 CDR2LQ86X02 465 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-208ENST00000641023 KIAA0319LQ8IZA0 1049 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 CALR3Q96L12 384 aaKnown RBP18.57■□□□□ 0.56
PHGDH-208ENST00000641023 AP5M1Q9H0R1 490 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 RNF14Q9UBS8 474 aa18.57■□□□□ 0.56
PHGDH-208ENST00000641023 CA12O43570 354 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 CSDE1O75534 798 aaKnown RBP18.56■□□□□ 0.56
PHGDH-208ENST00000641023 MCF2P10911 925 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 OSTNP61366 133 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 NOP14P78316 857 aaKnown RBP18.56■□□□□ 0.56
PHGDH-208ENST00000641023 AMHR2Q16671 573 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 SPOPLQ6IQ16 392 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 COG1Q8WTW3 980 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 HHIPL1Q96JK4 782 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 PSMB7Q99436 277 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 THAP2Q9H0W7 228 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 RPF1Q9H9Y2 349 aaKnown RBP18.56■□□□□ 0.56
PHGDH-208ENST00000641023 ACP6Q9NPH0 428 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 PCDHB2Q9Y5E7 798 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 NCANO14594 1321 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 B4GALT4O60513 344 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 ERLIN2O94905 339 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 IL18RAPO95256 599 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 MMEP08473 750 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 TMEM191BP0C7N4 346 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 CHRNB2P17787 502 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 CXCR5P32302 372 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 PAFAH1B1P43034 410 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 FMO1Q01740 532 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 POU5F1Q01860 360 aaKnown RBP18.56■□□□□ 0.56
PHGDH-208ENST00000641023 KYAT1Q16773 422 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 ZNF677Q86XU0 584 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 RHOT2Q8IXI1 618 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 LRRC57Q8N9N7 239 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 ARID3AQ99856 593 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 MTMR12Q9C0I1 747 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 EPC1Q9H2F5 836 aa18.56■□□□□ 0.56
PHGDH-208ENST00000641023 GPBP1L1Q9HC44 474 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-208ENST00000641023 CST3P01034 146 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-208ENST00000641023 CLTAP09496 248 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 SMIM10L2AP0DMW4 78 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 SMIM10L2BP0DMW5 78 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 ZSCAN20P17040 1043 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-208ENST00000641023 GPC5P78333 572 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 TRPC3Q13507 836 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 RPS6KA1Q15418 735 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 SGSM1Q2NKQ1 1148 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 DAAM2Q86T65 1068 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 CEP120Q8N960 986 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 TAF4BQ92750 862 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 KAT2BQ92831 832 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 ANKRD36BP1Q96IX9 119 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 PCDHB18PQ96TA0 734 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 PARD6BQ9BYG5 372 aa18.55■□□□□ 0.56
PHGDH-208ENST00000641023 APOBEC3GQ9HC16 384 aaKnown RBP18.55■□□□□ 0.56
PHGDH-208ENST00000641023 TNNC2P02585 160 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 ARF4P18085 180 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 TFAMQ00059 246 aaKnown RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 ITIH3Q06033 890 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 CFAP221Q4G0U5 840 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 SLFN11Q7Z7L1 901 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 DDX1Q92499 740 aaKnown RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 PDZD7Q9H5P4 517 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 OSGEPQ9NPF4 335 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 NUB1Q9Y5A7 615 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 KAT6AQ92794 2004 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 GPR25O00155 361 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 ASS1P00966 412 aaKnown RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 IGHA2P01877 340 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 TUBBP07437 444 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 MFSD10Q14728 455 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 PAXIP1Q6ZW49 1069 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 PEX26Q7Z412 305 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 NOA1Q8NC60 698 aaKnown RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 LENG1Q96BZ8 264 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-208ENST00000641023 ADPGKQ9BRR6 497 aa18.54■□□□□ 0.56
PHGDH-208ENST00000641023 SMIM35A0A1B0GVV1 85 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 PDE2AO00408 941 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms