RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FAM151AQ8WW52 585 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 CD101Q93033 1021 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.57■□□□□ 0.08
SCARB2-221ENST00000640341 SEPT9Q9UHD8 586 aaPredicted RBP15.57■□□□□ 0.08
SCARB2-221ENST00000640341 EXOC7Q9UPT5 735 aa15.57■□□□□ 0.08
SCARB2-221ENST00000640341 KCNJ2P63252 427 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 PLCB3Q01970 1234 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 SWSAP1Q6NVH7 229 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 TMEM270Q6UE05 265 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 ANO5Q75V66 913 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 FAM228AQ86W67 206 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 TMEM161BQ8NDZ6 487 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 TACO1Q9BSH4 297 aaKnown RBP15.56■□□□□ 0.08
SCARB2-221ENST00000640341 MRIQ9BWK5 157 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 TMEM8AQ9HCN3 771 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 GGA2Q9UJY4 613 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 TRIM33Q9UPN9 1127 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 AGAP1Q9UPQ3 857 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 SRRM3A6NNA2 597 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-221ENST00000640341 IFNB1P01574 187 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 ICAM1P05362 532 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 PSMC5P62195 406 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 N4BP2L2Q92802 583 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-221ENST00000640341 AAASQ9NRG9 546 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 FZD1Q9UP38 647 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 FOCADQ5VW36 1801 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 CYP1A2P05177 515 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 ZSCAN5DPP0CG00 497 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 PSMC4P43686 418 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 PLCB4Q15147 1175 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 MTERF2Q49AM1 385 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 B3GNT9Q6UX72 402 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 NLRX1Q86UT6 975 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 C3orf20Q8ND61 904 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 SNF8Q96H20 258 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.56■□□□□ 0.088e-7■□□□□ 10.3
SCARB2-221ENST00000640341 UVRAGQ9P2Y5 699 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 PNMA3Q9UL41 463 aa15.56■□□□□ 0.08
SCARB2-221ENST00000640341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCARB2-221ENST00000640341 ZNF536O15090 1300 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 GOLGA8SH3BPF8 625 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 GOLGA8MH3BSY2 632 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 EZRP15311 586 aaKnown RBP15.55■□□□□ 0.08
SCARB2-221ENST00000640341 ELF3P78545 371 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-221ENST00000640341 KCTD17Q8N5Z5 321 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 PRCCQ92733 491 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-221ENST00000640341 KDM4CQ9H3R0 1056 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 CNOT7Q9UIV1 285 aaKnown RBP15.55■□□□□ 0.08
SCARB2-221ENST00000640341 WDR64B1ANS9 1081 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 P4HA2O15460 535 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 GGPS1O95749 300 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 PIK3CAP42336 1068 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 WDR44Q5JSH3 913 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 TGS1Q96RS0 853 aaKnown RBP15.55■□□□□ 0.08
SCARB2-221ENST00000640341 ADGRA3Q8IWK6 1321 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 LIG4P49917 911 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 MPP2Q14168 576 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 CLEC4DQ8WXI8 215 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 PCDHB4Q9Y5E5 795 aa15.55■□□□□ 0.08
SCARB2-221ENST00000640341 ATRNL1Q5VV63 1379 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ATP8B3O60423 1300 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 GBP2P32456 591 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ALCAMQ13740 583 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 CLEC16AQ2KHT3 1053 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 CENPTQ96BT3 561 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 KLHL29Q96CT2 875 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 WNK4Q96J92 1243 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 IWS1Q96ST2 819 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ECT2Q9H8V3 914 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 NOD2Q9HC29 1040 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ZNF148Q9UQR1 794 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 EIF4E1BA6NMX2 242 aaKnown RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 SNX3O60493 162 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 TTC4O95801 387 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ASNSP08243 561 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 CETPP11597 493 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ETS1P14921 441 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 GBP1P32455 592 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 HADHBP55084 474 aaKnown RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 BAATQ14032 418 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 PGM5Q15124 567 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 IZUMO3Q5VZ72 239 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 SLC39A4Q6P5W5 647 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 RSBN1LQ6PCB5 846 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 MCOLN2Q8IZK6 566 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 PSPC1Q8WXF1 523 aaKnown RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 TMEM143Q96AN5 459 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ZBTB45Q96K62 511 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-221ENST00000640341 CXorf56Q9H5V9 222 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 NKIRAS1Q9NYS0 192 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 ADAM22Q9P0K1 906 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 C10orf71Q711Q0 1435 aa15.54■□□□□ 0.08
SCARB2-221ENST00000640341 A8MUI8 341 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 RASA4BC9J798 803 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 RASA4O43374 803 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 TAS2R40P59535 323 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 CYP24A1Q07973 514 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
SCARB2-221ENST00000640341 LRRC19Q9H756 370 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms