RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 GGA3Q9NZ52 723 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 TMEM110-MUSTN1A8MSY1 372 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 EIF3DO15371 548 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 SLC16A3O15427 465 aaKnown RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 CTNND1O60716 968 aaKnown RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 TCP1P17987 556 aaKnown RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 ZNF131P52739 623 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 BFSP1Q12934 665 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 CBWD2Q8IUF1 395 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 RPS6KC1Q96S38 1066 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 UBE2TQ9NPD8 197 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 LARSQ9P2J5 1176 aaKnown RBP13.21□□□□□ -0.29
SPIN3-236ENST00000640131 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
SPIN3-236ENST00000640131 ANKRD63C9JTQ0 380 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 FOXN3O00409 490 aaPredicted RBP13.21□□□□□ -0.3
SPIN3-236ENST00000640131 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.3
SPIN3-236ENST00000640131 RFC5P40937 340 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 STAT1P42224 750 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 GUCY2FP51841 1108 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 FOXR2Q6PJQ5 311 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 NCCRP1Q6ZVX7 275 aaPredicted RBP13.21□□□□□ -0.3
SPIN3-236ENST00000640131 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 LPAR1Q92633 364 aa13.21□□□□□ -0.3
SPIN3-236ENST00000640131 SYN2Q92777 582 aaPredicted RBP13.21□□□□□ -0.3
SPIN3-236ENST00000640131 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.3
SPIN3-236ENST00000640131 RPTORQ8N122 1335 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 CFAP73A6NFT4 308 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
SPIN3-236ENST00000640131 SLC26A4O43511 780 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 COPB2P35606 906 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 USP46P62068 366 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 GUCY2DQ02846 1103 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 DAAM2Q86T65 1068 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 PRCCQ92733 491 aaPredicted RBP13.2□□□□□ -0.3
SPIN3-236ENST00000640131 PCDH18Q9HCL0 1135 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 SUPT3HO75486 399 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 ADRB2P07550 413 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 GLI1P08151 1106 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 NR3C2P08235 984 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 KRT13P13646 458 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 PTPRAP18433 802 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 HPDP32754 393 aaPredicted RBP13.2□□□□□ -0.3
SPIN3-236ENST00000640131 GALCP54803 685 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 BACE1P56817 501 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 JAM2P57087 298 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 GKAP1Q5VSY0 366 aaPredicted RBP13.2□□□□□ -0.3
SPIN3-236ENST00000640131 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
SPIN3-236ENST00000640131 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 TRAPPC9Q96Q05 1148 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPIN3-236ENST00000640131 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 HSPBP1Q9NZL4 362 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
SPIN3-236ENST00000640131 hCG_2014768A0A024R1R8 64 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 PLA2G6O60733 806 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 SOX5P35711 763 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CCNG1P51959 295 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CFAP221Q4G0U5 840 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 GLE1Q53GS7 698 aaKnown RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 ANO5Q75V66 913 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 PHLDB2Q86SQ0 1253 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 SMC1BQ8NDV3 1235 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 TAF4BQ92750 862 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CEP170P1Q96L14 293 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 EPB41L5Q9HCM4 733 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 SEPT9Q9UHD8 586 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 NFU1Q9UMS0 254 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CCT8L1PA6NM43 557 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 DLATP10515 647 aaKnown RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-236ENST00000640131 RPS6KA1Q15418 735 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 MEI1Q5TIA1 1274 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 NANOGNBQ7Z5D8 188 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 TRIM11Q96F44 468 aa13.19□□□□□ -0.3
SPIN3-236ENST00000640131 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms