RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 SGMS1Q86VZ5 419 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 ADCY4Q8NFM4 1077 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 FBXO18Q8NFZ0 1043 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 CCDC17Q96LX7 622 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 MAP3K14Q99558 947 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 ALG1Q9BT22 464 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 ARHGAP39Q9C0H5 1083 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 KIAA1683Q9H0B3 1180 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 BCAS3Q9H6U6 928 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 IL17RBQ9NRM6 502 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 DACT1Q9NYF0 836 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 TMOD4Q9NZQ9 345 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 CLIP2Q9UDT6 1046 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 ELP1O95163 1332 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 ADGRA2Q96PE1 1338 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 PARP14Q460N5 1801 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 MGAMO43451 1857 aa6.89□□□□□ -1.31
ATM-229ENST00000639953 RLFQ13129 1914 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 COL11A1P12107 1806 aaPredicted RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 A0A1B0GTL3 188 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 GOLGA8AA7E2F4 631 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 SLC3A2P08195 630 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 PFKLP17858 780 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 VCAM1P19320 739 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 CTGFP29279 349 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 L1CAMP32004 1257 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 KRT85P78386 507 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 SP3Q02447 781 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 NPY5RQ15761 445 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 GNPTABQ3T906 1256 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 C17orf99Q6UX52 265 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 CYP2R1Q6VVX0 501 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 MFSD6Q6ZSS7 791 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 MICU3Q86XE3 530 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 CCAR1Q8IX12 1150 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 LRRC47Q8N1G4 583 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 ANKRD13CQ8N6S4 541 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 FAM184AQ8NB25 1140 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 CEP95Q96GE4 821 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 SPATA32Q96LK8 384 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 C12orf42Q96LP6 360 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 ZNF830Q96NB3 372 aaPredicted RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 CLIC6Q96NY7 704 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 PARK7Q99497 189 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 NUP88Q99567 741 aaPredicted RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 P2RX7Q99572 595 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 CLSTN2Q9H4D0 955 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 RPAP3Q9H6T3 665 aaPredicted RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 KANSL2Q9H9L4 492 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 ZCCHC17Q9NP64 241 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 LUC7LQ9NQ29 371 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 METTL5Q9NRN9 209 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 MTMR4Q9NYA4 1195 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 DIS3Q9Y2L1 958 aaKnown RBP6.88□□□□□ -1.31
ATM-229ENST00000639953 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
ATM-229ENST00000639953 NID2Q14112 1375 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 PLIN4Q96Q06 1357 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 A0A1B0GVL5 298 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 BTBD18B2RXH4 712 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 H3BQV1 296 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 ZBTB43O43298 467 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 ORC4O43929 436 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 PDCP20941 246 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 HOXA7P31268 230 aaPredicted RBP6.87□□□□□ -1.31
ATM-229ENST00000639953 MC3RP41968 323 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 LIFRP42702 1097 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 METAP2P50579 478 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATM-229ENST00000639953 USP14P54578 494 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 SLURP1P55000 103 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 HERVK_113P62684 666 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 IRX3P78415 501 aaPredicted RBP6.87□□□□□ -1.31
ATM-229ENST00000639953 PAK2Q13177 524 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 TARBP2Q15633 366 aaKnown RBP6.87□□□□□ -1.31
ATM-229ENST00000639953 DPY19L1Q2PZI1 675 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 FAM83BQ5T0W9 1011 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 SRBD1Q8N5C6 995 aaKnown RBP6.87□□□□□ -1.31
ATM-229ENST00000639953 LINC00301Q8NCQ3 95 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 SMCR8Q8TEV9 937 aaPredicted RBP6.87□□□□□ -1.31
ATM-229ENST00000639953 FNIP1Q8TF40 1166 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 C8orf76Q96K31 380 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 FGD4Q96M96 766 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 SLC26A6Q9BXS9 759 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 TANGO6Q9C0B7 1094 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 CPVLQ9H3G5 476 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 VCPKMTQ9H867 229 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 TXNRD2Q9NNW7 524 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 NYAP2Q9P242 653 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 FBLN5Q9UBX5 448 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 SUSD2Q9UGT4 822 aa6.87□□□□□ -1.31
ATM-229ENST00000639953 DBR1Q9UK59 544 aaKnown RBP6.87□□□□□ -1.31
ATM-229ENST00000639953 EFR3BQ9Y2G0 817 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms